Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rrp8Q9DB85 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rrp8Q9DB85 Gm16437-201ENSMUST00000025669 507 ntBASIC23.37■■□□□ 1.33
Rrp8Q9DB85 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rrp8Q9DB85 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.36■■□□□ 1.33
Rrp8Q9DB85 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rrp8Q9DB85 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rrp8Q9DB85 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rrp8Q9DB85 Mir3960-201ENSMUST00000198213 73 ntBASIC23.34■■□□□ 1.33
Rrp8Q9DB85 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rrp8Q9DB85 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rrp8Q9DB85 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rrp8Q9DB85 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rrp8Q9DB85 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.32■■□□□ 1.32
Rrp8Q9DB85 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.32■■□□□ 1.32
Rrp8Q9DB85 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rrp8Q9DB85 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Rrp8Q9DB85 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rrp8Q9DB85 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rrp8Q9DB85 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.3■■□□□ 1.32
Rrp8Q9DB85 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rrp8Q9DB85 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Rrp8Q9DB85 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.29■■□□□ 1.32
Rrp8Q9DB85 Gm12366-201ENSMUST00000121722 873 ntBASIC23.29■■□□□ 1.32
Rrp8Q9DB85 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.29■■□□□ 1.32
Rrp8Q9DB85 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rrp8Q9DB85 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.29■■□□□ 1.32
Rrp8Q9DB85 Gm5786-201ENSMUST00000085368 882 ntBASIC23.29■■□□□ 1.32
Rrp8Q9DB85 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rrp8Q9DB85 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.28■■□□□ 1.32
Rrp8Q9DB85 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.28■■□□□ 1.32
Rrp8Q9DB85 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rrp8Q9DB85 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.26■■□□□ 1.31
Rrp8Q9DB85 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rrp8Q9DB85 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rrp8Q9DB85 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rrp8Q9DB85 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rrp8Q9DB85 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rrp8Q9DB85 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rrp8Q9DB85 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rrp8Q9DB85 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rrp8Q9DB85 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rrp8Q9DB85 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rrp8Q9DB85 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rrp8Q9DB85 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rrp8Q9DB85 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rrp8Q9DB85 Gm37136-201ENSMUST00000194368 194 ntBASIC23.23■■□□□ 1.31
Rrp8Q9DB85 Gm45364-201ENSMUST00000210883 159 ntBASIC23.23■■□□□ 1.31
Rrp8Q9DB85 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rrp8Q9DB85 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rrp8Q9DB85 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rrp8Q9DB85 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.22■■□□□ 1.31
Rrp8Q9DB85 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rrp8Q9DB85 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rrp8Q9DB85 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rrp8Q9DB85 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rrp8Q9DB85 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.2■■□□□ 1.3
Rrp8Q9DB85 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rrp8Q9DB85 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rrp8Q9DB85 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rrp8Q9DB85 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rrp8Q9DB85 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rrp8Q9DB85 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rrp8Q9DB85 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rrp8Q9DB85 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rrp8Q9DB85 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rrp8Q9DB85 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rrp8Q9DB85 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rrp8Q9DB85 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rrp8Q9DB85 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rrp8Q9DB85 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Rrp8Q9DB85 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.16■■□□□ 1.3
Rrp8Q9DB85 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rrp8Q9DB85 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.16■■□□□ 1.3
Rrp8Q9DB85 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.16■■□□□ 1.3
Rrp8Q9DB85 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.15■■□□□ 1.3
Rrp8Q9DB85 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.15■■□□□ 1.3
Rrp8Q9DB85 Gm7332-201ENSMUST00000118351 454 ntBASIC23.14■■□□□ 1.29
Rrp8Q9DB85 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.14■■□□□ 1.29
Rrp8Q9DB85 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Rrp8Q9DB85 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rrp8Q9DB85 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rrp8Q9DB85 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rrp8Q9DB85 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rrp8Q9DB85 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rrp8Q9DB85 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.12■■□□□ 1.29
Rrp8Q9DB85 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rrp8Q9DB85 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rrp8Q9DB85 Gm27502-201ENSMUST00000183495 199 ntBASIC23.12■■□□□ 1.29
Rrp8Q9DB85 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.12■■□□□ 1.29
Rrp8Q9DB85 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
Rrp8Q9DB85 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rrp8Q9DB85 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rrp8Q9DB85 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Rrp8Q9DB85 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rrp8Q9DB85 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rrp8Q9DB85 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rrp8Q9DB85 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rrp8Q9DB85 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.09■■□□□ 1.29
Rrp8Q9DB85 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms