Protein–RNA interactions for Protein: Q9D7V2

Lysmd2, LysM and putative peptidoglycan-binding domain-containing protein 2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd2Q9D7V2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd2Q9D7V2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd2Q9D7V2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd2Q9D7V2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd2Q9D7V2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd2Q9D7V2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Lysmd2Q9D7V2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Lysmd2Q9D7V2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.4■□□□□ 0.7
Lysmd2Q9D7V2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd2Q9D7V2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd2Q9D7V2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Lysmd2Q9D7V2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lysmd2Q9D7V2 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.39■□□□□ 0.69
Lysmd2Q9D7V2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Lysmd2Q9D7V2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Lysmd2Q9D7V2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd2Q9D7V2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd2Q9D7V2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.38■□□□□ 0.69
Lysmd2Q9D7V2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd2Q9D7V2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lysmd2Q9D7V2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd2Q9D7V2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd2Q9D7V2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd2Q9D7V2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd2Q9D7V2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd2Q9D7V2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Lysmd2Q9D7V2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd2Q9D7V2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Lysmd2Q9D7V2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd2Q9D7V2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd2Q9D7V2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd2Q9D7V2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.31■□□□□ 0.68
Lysmd2Q9D7V2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd2Q9D7V2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd2Q9D7V2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Lysmd2Q9D7V2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd2Q9D7V2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd2Q9D7V2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd2Q9D7V2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd2Q9D7V2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd2Q9D7V2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lysmd2Q9D7V2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd2Q9D7V2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd2Q9D7V2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd2Q9D7V2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lysmd2Q9D7V2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Lysmd2Q9D7V2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd2Q9D7V2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lysmd2Q9D7V2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd2Q9D7V2 Gm26115-201ENSMUST00000175605 87 ntBASIC19.25■□□□□ 0.67
Lysmd2Q9D7V2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.25■□□□□ 0.67
Lysmd2Q9D7V2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd2Q9D7V2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lysmd2Q9D7V2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd2Q9D7V2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd2Q9D7V2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd2Q9D7V2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd2Q9D7V2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd2Q9D7V2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd2Q9D7V2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd2Q9D7V2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd2Q9D7V2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.22■□□□□ 0.67
Lysmd2Q9D7V2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd2Q9D7V2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lysmd2Q9D7V2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Lysmd2Q9D7V2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd2Q9D7V2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Lysmd2Q9D7V2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd2Q9D7V2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms