Protein–RNA interactions for Protein: Q9D7V2

Lysmd2, LysM and putative peptidoglycan-binding domain-containing protein 2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd2Q9D7V2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd2Q9D7V2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd2Q9D7V2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd2Q9D7V2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd2Q9D7V2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd2Q9D7V2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd2Q9D7V2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Lysmd2Q9D7V2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Lysmd2Q9D7V2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.4■□□□□ 0.7
Lysmd2Q9D7V2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd2Q9D7V2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd2Q9D7V2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Lysmd2Q9D7V2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lysmd2Q9D7V2 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.39■□□□□ 0.69
Lysmd2Q9D7V2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Lysmd2Q9D7V2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Lysmd2Q9D7V2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd2Q9D7V2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd2Q9D7V2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.38■□□□□ 0.69
Lysmd2Q9D7V2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd2Q9D7V2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lysmd2Q9D7V2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd2Q9D7V2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd2Q9D7V2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd2Q9D7V2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd2Q9D7V2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd2Q9D7V2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd2Q9D7V2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd2Q9D7V2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd2Q9D7V2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Lysmd2Q9D7V2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd2Q9D7V2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Lysmd2Q9D7V2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd2Q9D7V2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd2Q9D7V2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd2Q9D7V2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.31■□□□□ 0.68
Lysmd2Q9D7V2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd2Q9D7V2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd2Q9D7V2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Lysmd2Q9D7V2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd2Q9D7V2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd2Q9D7V2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd2Q9D7V2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd2Q9D7V2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd2Q9D7V2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lysmd2Q9D7V2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd2Q9D7V2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd2Q9D7V2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd2Q9D7V2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd2Q9D7V2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lysmd2Q9D7V2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Lysmd2Q9D7V2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd2Q9D7V2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lysmd2Q9D7V2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd2Q9D7V2 Gm26115-201ENSMUST00000175605 87 ntBASIC19.25■□□□□ 0.67
Lysmd2Q9D7V2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.25■□□□□ 0.67
Lysmd2Q9D7V2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd2Q9D7V2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lysmd2Q9D7V2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd2Q9D7V2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd2Q9D7V2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd2Q9D7V2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd2Q9D7V2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd2Q9D7V2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd2Q9D7V2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd2Q9D7V2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd2Q9D7V2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.22■□□□□ 0.67
Lysmd2Q9D7V2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd2Q9D7V2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lysmd2Q9D7V2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Lysmd2Q9D7V2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd2Q9D7V2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Lysmd2Q9D7V2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd2Q9D7V2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms