Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShpkQ9D5J6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ShpkQ9D5J6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShpkQ9D5J6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShpkQ9D5J6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShpkQ9D5J6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShpkQ9D5J6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShpkQ9D5J6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
ShpkQ9D5J6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShpkQ9D5J6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShpkQ9D5J6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShpkQ9D5J6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShpkQ9D5J6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShpkQ9D5J6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ShpkQ9D5J6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShpkQ9D5J6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ShpkQ9D5J6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.67■□□□□ 0.74
ShpkQ9D5J6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShpkQ9D5J6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ShpkQ9D5J6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ShpkQ9D5J6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ShpkQ9D5J6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ShpkQ9D5J6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ShpkQ9D5J6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ShpkQ9D5J6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ShpkQ9D5J6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ShpkQ9D5J6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ShpkQ9D5J6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.63■□□□□ 0.73
ShpkQ9D5J6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ShpkQ9D5J6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ShpkQ9D5J6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ShpkQ9D5J6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ShpkQ9D5J6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ShpkQ9D5J6 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.62■□□□□ 0.73
ShpkQ9D5J6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ShpkQ9D5J6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ShpkQ9D5J6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ShpkQ9D5J6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ShpkQ9D5J6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ShpkQ9D5J6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShpkQ9D5J6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.59■□□□□ 0.73
ShpkQ9D5J6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShpkQ9D5J6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShpkQ9D5J6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ShpkQ9D5J6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShpkQ9D5J6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ShpkQ9D5J6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ShpkQ9D5J6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ShpkQ9D5J6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ShpkQ9D5J6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ShpkQ9D5J6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ShpkQ9D5J6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
ShpkQ9D5J6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ShpkQ9D5J6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShpkQ9D5J6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
ShpkQ9D5J6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ShpkQ9D5J6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ShpkQ9D5J6 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.56■□□□□ 0.72
ShpkQ9D5J6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShpkQ9D5J6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShpkQ9D5J6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShpkQ9D5J6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShpkQ9D5J6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShpkQ9D5J6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShpkQ9D5J6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShpkQ9D5J6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShpkQ9D5J6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ShpkQ9D5J6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ShpkQ9D5J6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShpkQ9D5J6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShpkQ9D5J6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShpkQ9D5J6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.54■□□□□ 0.72
ShpkQ9D5J6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShpkQ9D5J6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ShpkQ9D5J6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
ShpkQ9D5J6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ShpkQ9D5J6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.53■□□□□ 0.72
ShpkQ9D5J6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ShpkQ9D5J6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ShpkQ9D5J6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ShpkQ9D5J6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ShpkQ9D5J6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ShpkQ9D5J6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ShpkQ9D5J6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ShpkQ9D5J6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ShpkQ9D5J6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
ShpkQ9D5J6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ShpkQ9D5J6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ShpkQ9D5J6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ShpkQ9D5J6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ShpkQ9D5J6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ShpkQ9D5J6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ShpkQ9D5J6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ShpkQ9D5J6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ShpkQ9D5J6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ShpkQ9D5J6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ShpkQ9D5J6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShpkQ9D5J6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShpkQ9D5J6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShpkQ9D5J6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms