Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2d6Q9D413 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2d6Q9D413 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2d6Q9D413 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2d6Q9D413 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d6Q9D413 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sh2d6Q9D413 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d6Q9D413 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.59■□□□□ 0.73
Sh2d6Q9D413 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d6Q9D413 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sh2d6Q9D413 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh2d6Q9D413 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.57■□□□□ 0.72
Sh2d6Q9D413 Gm7432-201ENSMUST00000210343 879 ntBASIC19.57■□□□□ 0.72
Sh2d6Q9D413 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.57■□□□□ 0.72
Sh2d6Q9D413 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d6Q9D413 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Sh2d6Q9D413 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d6Q9D413 Particl-201ENSMUST00000205370 1560 ntBASIC19.55■□□□□ 0.72
Sh2d6Q9D413 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.54■□□□□ 0.72
Sh2d6Q9D413 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh2d6Q9D413 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.54■□□□□ 0.72
Sh2d6Q9D413 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
Sh2d6Q9D413 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sh2d6Q9D413 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh2d6Q9D413 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d6Q9D413 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d6Q9D413 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.52■□□□□ 0.72
Sh2d6Q9D413 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d6Q9D413 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.51■□□□□ 0.71
Sh2d6Q9D413 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d6Q9D413 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d6Q9D413 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Sh2d6Q9D413 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.5■□□□□ 0.71
Sh2d6Q9D413 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d6Q9D413 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sh2d6Q9D413 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d6Q9D413 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.49■□□□□ 0.71
Sh2d6Q9D413 Gm11599-201ENSMUST00000118720 878 ntBASIC19.48■□□□□ 0.71
Sh2d6Q9D413 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.48■□□□□ 0.71
Sh2d6Q9D413 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sh2d6Q9D413 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d6Q9D413 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d6Q9D413 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d6Q9D413 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d6Q9D413 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d6Q9D413 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh2d6Q9D413 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d6Q9D413 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d6Q9D413 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d6Q9D413 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sh2d6Q9D413 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d6Q9D413 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d6Q9D413 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d6Q9D413 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sh2d6Q9D413 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sh2d6Q9D413 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d6Q9D413 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.41■□□□□ 0.7
Sh2d6Q9D413 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh2d6Q9D413 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh2d6Q9D413 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sh2d6Q9D413 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Sh2d6Q9D413 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sh2d6Q9D413 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.39■□□□□ 0.7
Sh2d6Q9D413 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d6Q9D413 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d6Q9D413 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d6Q9D413 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d6Q9D413 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d6Q9D413 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d6Q9D413 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.38■□□□□ 0.69
Sh2d6Q9D413 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.38■□□□□ 0.69
Sh2d6Q9D413 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Sh2d6Q9D413 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d6Q9D413 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.37■□□□□ 0.69
Sh2d6Q9D413 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d6Q9D413 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d6Q9D413 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d6Q9D413 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d6Q9D413 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.36■□□□□ 0.69
Sh2d6Q9D413 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d6Q9D413 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d6Q9D413 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d6Q9D413 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d6Q9D413 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sh2d6Q9D413 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d6Q9D413 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d6Q9D413 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d6Q9D413 Gm37136-201ENSMUST00000194368 194 ntBASIC19.33■□□□□ 0.68
Sh2d6Q9D413 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d6Q9D413 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d6Q9D413 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d6Q9D413 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d6Q9D413 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d6Q9D413 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sh2d6Q9D413 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d6Q9D413 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d6Q9D413 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d6Q9D413 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d6Q9D413 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d6Q9D413 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms