Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sft2d3Q9CSV6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sft2d3Q9CSV6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.9■□□□□ 0.78
Sft2d3Q9CSV6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sft2d3Q9CSV6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sft2d3Q9CSV6 Gm7432-201ENSMUST00000210343 879 ntBASIC19.89■□□□□ 0.77
Sft2d3Q9CSV6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sft2d3Q9CSV6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sft2d3Q9CSV6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sft2d3Q9CSV6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sft2d3Q9CSV6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sft2d3Q9CSV6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Sft2d3Q9CSV6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sft2d3Q9CSV6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.86■□□□□ 0.77
Sft2d3Q9CSV6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Sft2d3Q9CSV6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sft2d3Q9CSV6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.85■□□□□ 0.77
Sft2d3Q9CSV6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sft2d3Q9CSV6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sft2d3Q9CSV6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sft2d3Q9CSV6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sft2d3Q9CSV6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sft2d3Q9CSV6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sft2d3Q9CSV6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sft2d3Q9CSV6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Sft2d3Q9CSV6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sft2d3Q9CSV6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sft2d3Q9CSV6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sft2d3Q9CSV6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sft2d3Q9CSV6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sft2d3Q9CSV6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sft2d3Q9CSV6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sft2d3Q9CSV6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sft2d3Q9CSV6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
Sft2d3Q9CSV6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sft2d3Q9CSV6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sft2d3Q9CSV6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.81■□□□□ 0.76
Sft2d3Q9CSV6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sft2d3Q9CSV6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.81■□□□□ 0.76
Sft2d3Q9CSV6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Sft2d3Q9CSV6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Sft2d3Q9CSV6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.8■□□□□ 0.76
Sft2d3Q9CSV6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sft2d3Q9CSV6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sft2d3Q9CSV6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sft2d3Q9CSV6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sft2d3Q9CSV6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sft2d3Q9CSV6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sft2d3Q9CSV6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.78■□□□□ 0.76
Sft2d3Q9CSV6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sft2d3Q9CSV6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sft2d3Q9CSV6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.78■□□□□ 0.76
Sft2d3Q9CSV6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sft2d3Q9CSV6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sft2d3Q9CSV6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sft2d3Q9CSV6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sft2d3Q9CSV6 Gm11599-201ENSMUST00000118720 878 ntBASIC19.76■□□□□ 0.75
Sft2d3Q9CSV6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.76■□□□□ 0.75
Sft2d3Q9CSV6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.76■□□□□ 0.75
Sft2d3Q9CSV6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.75■□□□□ 0.75
Sft2d3Q9CSV6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sft2d3Q9CSV6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sft2d3Q9CSV6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sft2d3Q9CSV6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sft2d3Q9CSV6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sft2d3Q9CSV6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.74■□□□□ 0.75
Sft2d3Q9CSV6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sft2d3Q9CSV6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sft2d3Q9CSV6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sft2d3Q9CSV6 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.73■□□□□ 0.75
Sft2d3Q9CSV6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sft2d3Q9CSV6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sft2d3Q9CSV6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sft2d3Q9CSV6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sft2d3Q9CSV6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.73■□□□□ 0.75
Sft2d3Q9CSV6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sft2d3Q9CSV6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sft2d3Q9CSV6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sft2d3Q9CSV6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sft2d3Q9CSV6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sft2d3Q9CSV6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sft2d3Q9CSV6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
Sft2d3Q9CSV6 Gm30023-201ENSMUST00000197970 889 ntBASIC19.71■□□□□ 0.75
Sft2d3Q9CSV6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sft2d3Q9CSV6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sft2d3Q9CSV6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sft2d3Q9CSV6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sft2d3Q9CSV6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sft2d3Q9CSV6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sft2d3Q9CSV6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sft2d3Q9CSV6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sft2d3Q9CSV6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sft2d3Q9CSV6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sft2d3Q9CSV6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sft2d3Q9CSV6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sft2d3Q9CSV6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Sft2d3Q9CSV6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.66■□□□□ 0.74
Sft2d3Q9CSV6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sft2d3Q9CSV6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sft2d3Q9CSV6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms