Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sec61bQ9CQS8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.65□□□□□ -0.38
Sec61bQ9CQS8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC12.65□□□□□ -0.38
Sec61bQ9CQS8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Gm11175-201ENSMUST00000116172 543 ntBASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Gm4799-201ENSMUST00000095396 657 ntBASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61bQ9CQS8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61bQ9CQS8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61bQ9CQS8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sec61bQ9CQS8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sec61bQ9CQS8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Gm11687-201ENSMUST00000118911 886 ntBASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sec61bQ9CQS8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.59□□□□□ -0.39
Sec61bQ9CQS8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61bQ9CQS8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61bQ9CQS8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC12.59□□□□□ -0.39
Sec61bQ9CQS8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 AC154454.1-201ENSMUST00000225253 216 ntBASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61bQ9CQS8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61bQ9CQS8 Cap2-205ENSMUST00000225824 1634 ntBASIC12.57□□□□□ -0.4
Sec61bQ9CQS8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61bQ9CQS8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 Pkd1-207ENSMUST00000228550 1050 ntBASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 Gm9806-201ENSMUST00000051080 552 ntBASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61bQ9CQS8 Scarna2-201ENSMUST00000157560 414 ntBASIC12.55□□□□□ -0.4
Sec61bQ9CQS8 Mir3960-201ENSMUST00000198213 73 ntBASIC12.55□□□□□ -0.4
Sec61bQ9CQS8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Gm9905-201ENSMUST00000065740 1845 ntBASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61bQ9CQS8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC12.52□□□□□ -0.4
Sec61bQ9CQS8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61bQ9CQS8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61bQ9CQS8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61bQ9CQS8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC12.52□□□□□ -0.41
Sec61bQ9CQS8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61bQ9CQS8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC12.52□□□□□ -0.41
Sec61bQ9CQS8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms