Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.41■■□□□ 1.02
Ubqln4Q99NB8 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.41■■□□□ 1.02
Ubqln4Q99NB8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubqln4Q99NB8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ubqln4Q99NB8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubqln4Q99NB8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ubqln4Q99NB8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubqln4Q99NB8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ubqln4Q99NB8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ubqln4Q99NB8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Ubqln4Q99NB8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ubqln4Q99NB8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ubqln4Q99NB8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubqln4Q99NB8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubqln4Q99NB8 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.38■■□□□ 1.01
Ubqln4Q99NB8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubqln4Q99NB8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubqln4Q99NB8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ubqln4Q99NB8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.36■■□□□ 1.01
Ubqln4Q99NB8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ubqln4Q99NB8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubqln4Q99NB8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubqln4Q99NB8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ubqln4Q99NB8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubqln4Q99NB8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubqln4Q99NB8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.34■■□□□ 1.01
Ubqln4Q99NB8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubqln4Q99NB8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubqln4Q99NB8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubqln4Q99NB8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubqln4Q99NB8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubqln4Q99NB8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.31■■□□□ 1
Ubqln4Q99NB8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ubqln4Q99NB8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.3■■□□□ 1
Ubqln4Q99NB8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ubqln4Q99NB8 Gm6821-201ENSMUST00000107540 542 ntBASIC21.29■■□□□ 1
Ubqln4Q99NB8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ubqln4Q99NB8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubqln4Q99NB8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ubqln4Q99NB8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubqln4Q99NB8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubqln4Q99NB8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.28■■□□□ 1
Ubqln4Q99NB8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubqln4Q99NB8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubqln4Q99NB8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.27■■□□□ 1
Ubqln4Q99NB8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.26■□□□□ 0.99
Ubqln4Q99NB8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Ubqln4Q99NB8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubqln4Q99NB8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubqln4Q99NB8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.26■□□□□ 0.99
Ubqln4Q99NB8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ubqln4Q99NB8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ubqln4Q99NB8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubqln4Q99NB8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.24■□□□□ 0.99
Ubqln4Q99NB8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.24■□□□□ 0.99
Ubqln4Q99NB8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.23■□□□□ 0.99
Ubqln4Q99NB8 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.23■□□□□ 0.99
Ubqln4Q99NB8 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.23■□□□□ 0.99
Ubqln4Q99NB8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ubqln4Q99NB8 Particl-201ENSMUST00000205370 1560 ntBASIC21.22■□□□□ 0.99
Ubqln4Q99NB8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubqln4Q99NB8 Gm8503-201ENSMUST00000118131 455 ntBASIC21.2■□□□□ 0.98
Ubqln4Q99NB8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubqln4Q99NB8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ubqln4Q99NB8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ubqln4Q99NB8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ubqln4Q99NB8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.19■□□□□ 0.98
Ubqln4Q99NB8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ubqln4Q99NB8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubqln4Q99NB8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubqln4Q99NB8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubqln4Q99NB8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ubqln4Q99NB8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.18■□□□□ 0.98
Ubqln4Q99NB8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubqln4Q99NB8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ubqln4Q99NB8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ubqln4Q99NB8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubqln4Q99NB8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ubqln4Q99NB8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubqln4Q99NB8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubqln4Q99NB8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.17■□□□□ 0.98
Ubqln4Q99NB8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubqln4Q99NB8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ubqln4Q99NB8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.16■□□□□ 0.98
Ubqln4Q99NB8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubqln4Q99NB8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubqln4Q99NB8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubqln4Q99NB8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubqln4Q99NB8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Ubqln4Q99NB8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ubqln4Q99NB8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ubqln4Q99NB8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
Ubqln4Q99NB8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ubqln4Q99NB8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ubqln4Q99NB8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.13■□□□□ 0.97
Ubqln4Q99NB8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubqln4Q99NB8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ubqln4Q99NB8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ubqln4Q99NB8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.11■□□□□ 0.97
Ubqln4Q99NB8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms