Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Slc44a4Q91VA1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.48■■■□□ 2.15
Slc44a4Q91VA1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Slc44a4Q91VA1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Slc44a4Q91VA1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Slc44a4Q91VA1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Slc44a4Q91VA1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Slc44a4Q91VA1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Slc44a4Q91VA1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Slc44a4Q91VA1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Slc44a4Q91VA1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Slc44a4Q91VA1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Slc44a4Q91VA1 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.43■■■□□ 2.14
Slc44a4Q91VA1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.43■■■□□ 2.14
Slc44a4Q91VA1 Scarna2-201ENSMUST00000157560 414 ntBASIC28.43■■■□□ 2.14
Slc44a4Q91VA1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Slc44a4Q91VA1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.43■■■□□ 2.14
Slc44a4Q91VA1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.43■■■□□ 2.14
Slc44a4Q91VA1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.42■■■□□ 2.14
Slc44a4Q91VA1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Slc44a4Q91VA1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Slc44a4Q91VA1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.42■■■□□ 2.14
Slc44a4Q91VA1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Slc44a4Q91VA1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Slc44a4Q91VA1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Slc44a4Q91VA1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
Slc44a4Q91VA1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Slc44a4Q91VA1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Slc44a4Q91VA1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Slc44a4Q91VA1 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.37■■■□□ 2.13
Slc44a4Q91VA1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Slc44a4Q91VA1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.36■■■□□ 2.13
Slc44a4Q91VA1 Gm4799-201ENSMUST00000095396 657 ntBASIC28.36■■■□□ 2.13
Slc44a4Q91VA1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Slc44a4Q91VA1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.35■■■□□ 2.13
Slc44a4Q91VA1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Slc44a4Q91VA1 Gm37136-201ENSMUST00000194368 194 ntBASIC28.35■■■□□ 2.13
Slc44a4Q91VA1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.34■■■□□ 2.13
Slc44a4Q91VA1 Gm45364-201ENSMUST00000210883 159 ntBASIC28.34■■■□□ 2.13
Slc44a4Q91VA1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Slc44a4Q91VA1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
Slc44a4Q91VA1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Slc44a4Q91VA1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.32■■■□□ 2.12
Slc44a4Q91VA1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Slc44a4Q91VA1 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.31■■■□□ 2.12
Slc44a4Q91VA1 Gm9806-201ENSMUST00000051080 552 ntBASIC28.31■■■□□ 2.12
Slc44a4Q91VA1 Mir3960-201ENSMUST00000198213 73 ntBASIC28.3■■■□□ 2.12
Slc44a4Q91VA1 Gm16437-201ENSMUST00000025669 507 ntBASIC28.3■■■□□ 2.12
Slc44a4Q91VA1 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.29■■■□□ 2.12
Slc44a4Q91VA1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Slc44a4Q91VA1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Slc44a4Q91VA1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Slc44a4Q91VA1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.27■■■□□ 2.12
Slc44a4Q91VA1 Gm11687-201ENSMUST00000118911 886 ntBASIC28.26■■■□□ 2.11
Slc44a4Q91VA1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Slc44a4Q91VA1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.25■■■□□ 2.11
Slc44a4Q91VA1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Slc44a4Q91VA1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Slc44a4Q91VA1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Slc44a4Q91VA1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Slc44a4Q91VA1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Slc44a4Q91VA1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Slc44a4Q91VA1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Slc44a4Q91VA1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Slc44a4Q91VA1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Slc44a4Q91VA1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.23■■■□□ 2.11
Slc44a4Q91VA1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Slc44a4Q91VA1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Slc44a4Q91VA1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Slc44a4Q91VA1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Slc44a4Q91VA1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.21■■■□□ 2.11
Slc44a4Q91VA1 Gm12366-201ENSMUST00000121722 873 ntBASIC28.21■■■□□ 2.11
Slc44a4Q91VA1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.21■■■□□ 2.11
Slc44a4Q91VA1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.21■■■□□ 2.11
Slc44a4Q91VA1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.21■■■□□ 2.11
Slc44a4Q91VA1 Gm5786-201ENSMUST00000085368 882 ntBASIC28.21■■■□□ 2.11
Slc44a4Q91VA1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Slc44a4Q91VA1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.2■■■□□ 2.1
Slc44a4Q91VA1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.19■■■□□ 2.1
Slc44a4Q91VA1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Slc44a4Q91VA1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.18■■■□□ 2.1
Slc44a4Q91VA1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Slc44a4Q91VA1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Slc44a4Q91VA1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.17■■■□□ 2.1
Slc44a4Q91VA1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Slc44a4Q91VA1 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.15■■■□□ 2.1
Slc44a4Q91VA1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.15■■■□□ 2.1
Slc44a4Q91VA1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.15■■■□□ 2.1
Slc44a4Q91VA1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Slc44a4Q91VA1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Slc44a4Q91VA1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Slc44a4Q91VA1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.14■■■□□ 2.1
Slc44a4Q91VA1 Gm27502-201ENSMUST00000183495 199 ntBASIC28.14■■■□□ 2.1
Slc44a4Q91VA1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Slc44a4Q91VA1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Slc44a4Q91VA1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Slc44a4Q91VA1 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.13■■■□□ 2.09
Slc44a4Q91VA1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Slc44a4Q91VA1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Slc44a4Q91VA1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms