Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ccdc65Q8VHI7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ccdc65Q8VHI7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ccdc65Q8VHI7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Ccdc65Q8VHI7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Ccdc65Q8VHI7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ccdc65Q8VHI7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Ccdc65Q8VHI7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Ccdc65Q8VHI7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Ccdc65Q8VHI7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ccdc65Q8VHI7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ccdc65Q8VHI7 Nkain2-201ENSMUST00000092602 558 ntBASIC24.73■■□□□ 1.55
Ccdc65Q8VHI7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Ccdc65Q8VHI7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ccdc65Q8VHI7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ccdc65Q8VHI7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.72■■□□□ 1.55
Ccdc65Q8VHI7 Gm30023-201ENSMUST00000197970 889 ntBASIC24.72■■□□□ 1.55
Ccdc65Q8VHI7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Ccdc65Q8VHI7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.72■■□□□ 1.55
Ccdc65Q8VHI7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ccdc65Q8VHI7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ccdc65Q8VHI7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ccdc65Q8VHI7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
Ccdc65Q8VHI7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ccdc65Q8VHI7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Ccdc65Q8VHI7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ccdc65Q8VHI7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Ccdc65Q8VHI7 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.7■■□□□ 1.54
Ccdc65Q8VHI7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ccdc65Q8VHI7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.69■■□□□ 1.54
Ccdc65Q8VHI7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ccdc65Q8VHI7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
Ccdc65Q8VHI7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc65Q8VHI7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc65Q8VHI7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc65Q8VHI7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc65Q8VHI7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc65Q8VHI7 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.67■■□□□ 1.54
Ccdc65Q8VHI7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.65■■□□□ 1.54
Ccdc65Q8VHI7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc65Q8VHI7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.64■■□□□ 1.54
Ccdc65Q8VHI7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ccdc65Q8VHI7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Ccdc65Q8VHI7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc65Q8VHI7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc65Q8VHI7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
Ccdc65Q8VHI7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ccdc65Q8VHI7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ccdc65Q8VHI7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc65Q8VHI7 Gm6821-201ENSMUST00000107540 542 ntBASIC24.61■■□□□ 1.53
Ccdc65Q8VHI7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.61■■□□□ 1.53
Ccdc65Q8VHI7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
Ccdc65Q8VHI7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Ccdc65Q8VHI7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc65Q8VHI7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc65Q8VHI7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.59■■□□□ 1.53
Ccdc65Q8VHI7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc65Q8VHI7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc65Q8VHI7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc65Q8VHI7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc65Q8VHI7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc65Q8VHI7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.58■■□□□ 1.53
Ccdc65Q8VHI7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccdc65Q8VHI7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.57■■□□□ 1.52
Ccdc65Q8VHI7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Ccdc65Q8VHI7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccdc65Q8VHI7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccdc65Q8VHI7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc65Q8VHI7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc65Q8VHI7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc65Q8VHI7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc65Q8VHI7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ccdc65Q8VHI7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.53■■□□□ 1.52
Ccdc65Q8VHI7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Ccdc65Q8VHI7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Ccdc65Q8VHI7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc65Q8VHI7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Ccdc65Q8VHI7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.51■■□□□ 1.51
Ccdc65Q8VHI7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.51■■□□□ 1.51
Ccdc65Q8VHI7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc65Q8VHI7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.5■■□□□ 1.51
Ccdc65Q8VHI7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc65Q8VHI7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc65Q8VHI7 Gm8503-201ENSMUST00000118131 455 ntBASIC24.49■■□□□ 1.51
Ccdc65Q8VHI7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.49■■□□□ 1.51
Ccdc65Q8VHI7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.48■■□□□ 1.51
Ccdc65Q8VHI7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc65Q8VHI7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc65Q8VHI7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.47■■□□□ 1.51
Ccdc65Q8VHI7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Ccdc65Q8VHI7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc65Q8VHI7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.46■■□□□ 1.51
Ccdc65Q8VHI7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Ccdc65Q8VHI7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc65Q8VHI7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.45■■□□□ 1.5
Ccdc65Q8VHI7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc65Q8VHI7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc65Q8VHI7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc65Q8VHI7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Ccdc65Q8VHI7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms