Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.7■□□□□ 0.74
Cdpf1Q8R3A2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdpf1Q8R3A2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cdpf1Q8R3A2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdpf1Q8R3A2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.69■□□□□ 0.74
Cdpf1Q8R3A2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdpf1Q8R3A2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdpf1Q8R3A2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdpf1Q8R3A2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.69■□□□□ 0.74
Cdpf1Q8R3A2 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.68■□□□□ 0.74
Cdpf1Q8R3A2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdpf1Q8R3A2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdpf1Q8R3A2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdpf1Q8R3A2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Cdpf1Q8R3A2 Gm7332-201ENSMUST00000118351 454 ntBASIC19.67■□□□□ 0.74
Cdpf1Q8R3A2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.67■□□□□ 0.74
Cdpf1Q8R3A2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdpf1Q8R3A2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdpf1Q8R3A2 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.66■□□□□ 0.74
Cdpf1Q8R3A2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.66■□□□□ 0.74
Cdpf1Q8R3A2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdpf1Q8R3A2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdpf1Q8R3A2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdpf1Q8R3A2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
Cdpf1Q8R3A2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Cdpf1Q8R3A2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.64■□□□□ 0.73
Cdpf1Q8R3A2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdpf1Q8R3A2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdpf1Q8R3A2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdpf1Q8R3A2 Mir3960-201ENSMUST00000198213 73 ntBASIC19.63■□□□□ 0.73
Cdpf1Q8R3A2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdpf1Q8R3A2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cdpf1Q8R3A2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdpf1Q8R3A2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdpf1Q8R3A2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.61■□□□□ 0.73
Cdpf1Q8R3A2 Gm27502-201ENSMUST00000183495 199 ntBASIC19.61■□□□□ 0.73
Cdpf1Q8R3A2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cdpf1Q8R3A2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdpf1Q8R3A2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.59■□□□□ 0.73
Cdpf1Q8R3A2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdpf1Q8R3A2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdpf1Q8R3A2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdpf1Q8R3A2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdpf1Q8R3A2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdpf1Q8R3A2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdpf1Q8R3A2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdpf1Q8R3A2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdpf1Q8R3A2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdpf1Q8R3A2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.57■□□□□ 0.72
Cdpf1Q8R3A2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdpf1Q8R3A2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdpf1Q8R3A2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdpf1Q8R3A2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Cdpf1Q8R3A2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cdpf1Q8R3A2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdpf1Q8R3A2 Gm45364-201ENSMUST00000210883 159 ntBASIC19.56■□□□□ 0.72
Cdpf1Q8R3A2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdpf1Q8R3A2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.55■□□□□ 0.72
Cdpf1Q8R3A2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdpf1Q8R3A2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdpf1Q8R3A2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdpf1Q8R3A2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdpf1Q8R3A2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdpf1Q8R3A2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cdpf1Q8R3A2 Gm15039-201ENSMUST00000118914 875 ntBASIC19.51■□□□□ 0.71
Cdpf1Q8R3A2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdpf1Q8R3A2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdpf1Q8R3A2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdpf1Q8R3A2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdpf1Q8R3A2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdpf1Q8R3A2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdpf1Q8R3A2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdpf1Q8R3A2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdpf1Q8R3A2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdpf1Q8R3A2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdpf1Q8R3A2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdpf1Q8R3A2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdpf1Q8R3A2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.49■□□□□ 0.71
Cdpf1Q8R3A2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdpf1Q8R3A2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdpf1Q8R3A2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdpf1Q8R3A2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdpf1Q8R3A2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdpf1Q8R3A2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.47■□□□□ 0.71
Cdpf1Q8R3A2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdpf1Q8R3A2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdpf1Q8R3A2 Gm14523-201ENSMUST00000117260 558 ntBASIC19.46■□□□□ 0.71
Cdpf1Q8R3A2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdpf1Q8R3A2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cdpf1Q8R3A2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdpf1Q8R3A2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.44■□□□□ 0.7
Cdpf1Q8R3A2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdpf1Q8R3A2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdpf1Q8R3A2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cdpf1Q8R3A2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdpf1Q8R3A2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.43■□□□□ 0.7
Cdpf1Q8R3A2 Gm37136-201ENSMUST00000194368 194 ntBASIC19.42■□□□□ 0.7
Cdpf1Q8R3A2 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.42■□□□□ 0.7
Cdpf1Q8R3A2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdpf1Q8R3A2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms