Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r38Q8R2E1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r38Q8R2E1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r38Q8R2E1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vmn1r38Q8R2E1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r38Q8R2E1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.04■■□□□ 1.12
Vmn1r38Q8R2E1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r38Q8R2E1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r38Q8R2E1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Vmn1r38Q8R2E1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vmn1r38Q8R2E1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vmn1r38Q8R2E1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vmn1r38Q8R2E1 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.03■■□□□ 1.12
Vmn1r38Q8R2E1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Vmn1r38Q8R2E1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Vmn1r38Q8R2E1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.03■■□□□ 1.12
Vmn1r38Q8R2E1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Vmn1r38Q8R2E1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Vmn1r38Q8R2E1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.02■■□□□ 1.12
Vmn1r38Q8R2E1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vmn1r38Q8R2E1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vmn1r38Q8R2E1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vmn1r38Q8R2E1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22■■□□□ 1.11
Vmn1r38Q8R2E1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vmn1r38Q8R2E1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Vmn1r38Q8R2E1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22■■□□□ 1.11
Vmn1r38Q8R2E1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22■■□□□ 1.11
Vmn1r38Q8R2E1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22■■□□□ 1.11
Vmn1r38Q8R2E1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vmn1r38Q8R2E1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vmn1r38Q8R2E1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vmn1r38Q8R2E1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Vmn1r38Q8R2E1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.99■■□□□ 1.11
Vmn1r38Q8R2E1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vmn1r38Q8R2E1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Vmn1r38Q8R2E1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vmn1r38Q8R2E1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vmn1r38Q8R2E1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vmn1r38Q8R2E1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vmn1r38Q8R2E1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.97■■□□□ 1.11
Vmn1r38Q8R2E1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vmn1r38Q8R2E1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vmn1r38Q8R2E1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vmn1r38Q8R2E1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vmn1r38Q8R2E1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Vmn1r38Q8R2E1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vmn1r38Q8R2E1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vmn1r38Q8R2E1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Vmn1r38Q8R2E1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vmn1r38Q8R2E1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Vmn1r38Q8R2E1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.95■■□□□ 1.1
Vmn1r38Q8R2E1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vmn1r38Q8R2E1 Zfp131-205ENSMUST00000223812 663 ntBASIC21.94■■□□□ 1.1
Vmn1r38Q8R2E1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vmn1r38Q8R2E1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.93■■□□□ 1.1
Vmn1r38Q8R2E1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.93■■□□□ 1.1
Vmn1r38Q8R2E1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vmn1r38Q8R2E1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vmn1r38Q8R2E1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vmn1r38Q8R2E1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vmn1r38Q8R2E1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.91■■□□□ 1.1
Vmn1r38Q8R2E1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.91■■□□□ 1.1
Vmn1r38Q8R2E1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r38Q8R2E1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r38Q8R2E1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r38Q8R2E1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r38Q8R2E1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r38Q8R2E1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r38Q8R2E1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vmn1r38Q8R2E1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vmn1r38Q8R2E1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
Vmn1r38Q8R2E1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vmn1r38Q8R2E1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
Vmn1r38Q8R2E1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Vmn1r38Q8R2E1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vmn1r38Q8R2E1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.88■■□□□ 1.09
Vmn1r38Q8R2E1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r38Q8R2E1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r38Q8R2E1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r38Q8R2E1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.87■■□□□ 1.09
Vmn1r38Q8R2E1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.87■■□□□ 1.09
Vmn1r38Q8R2E1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vmn1r38Q8R2E1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Vmn1r38Q8R2E1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Vmn1r38Q8R2E1 Gm9397-201ENSMUST00000200125 605 ntBASIC21.86■■□□□ 1.09
Vmn1r38Q8R2E1 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.86■■□□□ 1.09
Vmn1r38Q8R2E1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vmn1r38Q8R2E1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vmn1r38Q8R2E1 Gm30023-201ENSMUST00000197970 889 ntBASIC21.84■■□□□ 1.09
Vmn1r38Q8R2E1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vmn1r38Q8R2E1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vmn1r38Q8R2E1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vmn1r38Q8R2E1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vmn1r38Q8R2E1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vmn1r38Q8R2E1 Gm24970-201ENSMUST00000175582 82 ntBASIC21.82■■□□□ 1.08
Vmn1r38Q8R2E1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vmn1r38Q8R2E1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Vmn1r38Q8R2E1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vmn1r38Q8R2E1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vmn1r38Q8R2E1 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms