Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.69■■□□□ 1.06
Vmn1r28Q8R2C9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r28Q8R2C9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.69■■□□□ 1.06
Vmn1r28Q8R2C9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r28Q8R2C9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r28Q8R2C9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vmn1r28Q8R2C9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r28Q8R2C9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r28Q8R2C9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r28Q8R2C9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r28Q8R2C9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Vmn1r28Q8R2C9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.63■■□□□ 1.05
Vmn1r28Q8R2C9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r28Q8R2C9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r28Q8R2C9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r28Q8R2C9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r28Q8R2C9 Gm7432-201ENSMUST00000210343 879 ntBASIC21.61■■□□□ 1.05
Vmn1r28Q8R2C9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.61■■□□□ 1.05
Vmn1r28Q8R2C9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r28Q8R2C9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r28Q8R2C9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.6■■□□□ 1.05
Vmn1r28Q8R2C9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
Vmn1r28Q8R2C9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Vmn1r28Q8R2C9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
Vmn1r28Q8R2C9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r28Q8R2C9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r28Q8R2C9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r28Q8R2C9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vmn1r28Q8R2C9 Particl-201ENSMUST00000205370 1560 ntBASIC21.58■■□□□ 1.05
Vmn1r28Q8R2C9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.57■■□□□ 1.04
Vmn1r28Q8R2C9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Vmn1r28Q8R2C9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r28Q8R2C9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.56■■□□□ 1.04
Vmn1r28Q8R2C9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.56■■□□□ 1.04
Vmn1r28Q8R2C9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r28Q8R2C9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r28Q8R2C9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r28Q8R2C9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r28Q8R2C9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r28Q8R2C9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.53■■□□□ 1.04
Vmn1r28Q8R2C9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.53■■□□□ 1.04
Vmn1r28Q8R2C9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r28Q8R2C9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r28Q8R2C9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r28Q8R2C9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.52■■□□□ 1.04
Vmn1r28Q8R2C9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r28Q8R2C9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r28Q8R2C9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vmn1r28Q8R2C9 Gm11599-201ENSMUST00000118720 878 ntBASIC21.51■■□□□ 1.03
Vmn1r28Q8R2C9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r28Q8R2C9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r28Q8R2C9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r28Q8R2C9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r28Q8R2C9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Vmn1r28Q8R2C9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Vmn1r28Q8R2C9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r28Q8R2C9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Vmn1r28Q8R2C9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r28Q8R2C9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r28Q8R2C9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r28Q8R2C9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Vmn1r28Q8R2C9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
Vmn1r28Q8R2C9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Vmn1r28Q8R2C9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.45■■□□□ 1.02
Vmn1r28Q8R2C9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Vmn1r28Q8R2C9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r28Q8R2C9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Vmn1r28Q8R2C9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r28Q8R2C9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r28Q8R2C9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r28Q8R2C9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.45■■□□□ 1.02
Vmn1r28Q8R2C9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Vmn1r28Q8R2C9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Vmn1r28Q8R2C9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vmn1r28Q8R2C9 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.43■■□□□ 1.02
Vmn1r28Q8R2C9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vmn1r28Q8R2C9 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.42■■□□□ 1.02
Vmn1r28Q8R2C9 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.42■■□□□ 1.02
Vmn1r28Q8R2C9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r28Q8R2C9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r28Q8R2C9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r28Q8R2C9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.41■■□□□ 1.02
Vmn1r28Q8R2C9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r28Q8R2C9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r28Q8R2C9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r28Q8R2C9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r28Q8R2C9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r28Q8R2C9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r28Q8R2C9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r28Q8R2C9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r28Q8R2C9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r28Q8R2C9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r28Q8R2C9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r28Q8R2C9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r28Q8R2C9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r28Q8R2C9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r28Q8R2C9 Gm37136-201ENSMUST00000194368 194 ntBASIC21.36■■□□□ 1.01
Vmn1r28Q8R2C9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r28Q8R2C9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r28Q8R2C9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms