Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cystm1Q8K353 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cystm1Q8K353 H3f3aos-201ENSMUST00000097448 2905 ntBASIC14.7□□□□□ -0.06
Cystm1Q8K353 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cystm1Q8K353 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cystm1Q8K353 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cystm1Q8K353 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Cystm1Q8K353 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cystm1Q8K353 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cystm1Q8K353 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cystm1Q8K353 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cystm1Q8K353 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cystm1Q8K353 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cystm1Q8K353 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cystm1Q8K353 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cystm1Q8K353 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cystm1Q8K353 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cystm1Q8K353 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Cystm1Q8K353 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14.67□□□□□ -0.06
Cystm1Q8K353 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cystm1Q8K353 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cystm1Q8K353 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cystm1Q8K353 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cystm1Q8K353 Notumos-201ENSMUST00000151998 2659 ntBASIC14.66□□□□□ -0.06
Cystm1Q8K353 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cystm1Q8K353 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cystm1Q8K353 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cystm1Q8K353 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cystm1Q8K353 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cystm1Q8K353 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cystm1Q8K353 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.64□□□□□ -0.07
Cystm1Q8K353 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cystm1Q8K353 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cystm1Q8K353 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cystm1Q8K353 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cystm1Q8K353 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cystm1Q8K353 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cystm1Q8K353 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cystm1Q8K353 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cystm1Q8K353 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cystm1Q8K353 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cystm1Q8K353 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cystm1Q8K353 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cystm1Q8K353 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC14.62□□□□□ -0.07
Cystm1Q8K353 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cystm1Q8K353 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC14.61□□□□□ -0.07
Cystm1Q8K353 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cystm1Q8K353 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cystm1Q8K353 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cystm1Q8K353 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cystm1Q8K353 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cystm1Q8K353 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cystm1Q8K353 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cystm1Q8K353 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cystm1Q8K353 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cystm1Q8K353 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cystm1Q8K353 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cystm1Q8K353 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Cystm1Q8K353 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cystm1Q8K353 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cystm1Q8K353 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.58□□□□□ -0.08
Cystm1Q8K353 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cystm1Q8K353 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cystm1Q8K353 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cystm1Q8K353 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cystm1Q8K353 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cystm1Q8K353 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cystm1Q8K353 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cystm1Q8K353 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cystm1Q8K353 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC14.57□□□□□ -0.08
Cystm1Q8K353 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cystm1Q8K353 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cystm1Q8K353 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cystm1Q8K353 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cystm1Q8K353 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cystm1Q8K353 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cystm1Q8K353 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cystm1Q8K353 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cystm1Q8K353 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cystm1Q8K353 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Cystm1Q8K353 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cystm1Q8K353 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cystm1Q8K353 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cystm1Q8K353 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cystm1Q8K353 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cystm1Q8K353 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Cystm1Q8K353 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cystm1Q8K353 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cystm1Q8K353 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cystm1Q8K353 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cystm1Q8K353 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC14.54□□□□□ -0.08
Cystm1Q8K353 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cystm1Q8K353 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cystm1Q8K353 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cystm1Q8K353 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cystm1Q8K353 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cystm1Q8K353 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cystm1Q8K353 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cystm1Q8K353 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cystm1Q8K353 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms