Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Polr2bQ8CFI7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Polr2bQ8CFI7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
Polr2bQ8CFI7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.37■■□□□ 1.65
Polr2bQ8CFI7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Polr2bQ8CFI7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
Polr2bQ8CFI7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Polr2bQ8CFI7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Polr2bQ8CFI7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.36■■□□□ 1.65
Polr2bQ8CFI7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.36■■□□□ 1.65
Polr2bQ8CFI7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Polr2bQ8CFI7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Polr2bQ8CFI7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
Polr2bQ8CFI7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.34■■□□□ 1.65
Polr2bQ8CFI7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.34■■□□□ 1.65
Polr2bQ8CFI7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Polr2bQ8CFI7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Polr2bQ8CFI7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Polr2bQ8CFI7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Polr2bQ8CFI7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Polr2bQ8CFI7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.31■■□□□ 1.64
Polr2bQ8CFI7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Polr2bQ8CFI7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Polr2bQ8CFI7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Polr2bQ8CFI7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Polr2bQ8CFI7 Particl-201ENSMUST00000205370 1560 ntBASIC25.28■■□□□ 1.64
Polr2bQ8CFI7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Polr2bQ8CFI7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.27■■□□□ 1.64
Polr2bQ8CFI7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Polr2bQ8CFI7 Gm11599-201ENSMUST00000118720 878 ntBASIC25.26■■□□□ 1.63
Polr2bQ8CFI7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Polr2bQ8CFI7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Polr2bQ8CFI7 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.24■■□□□ 1.63
Polr2bQ8CFI7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.24■■□□□ 1.63
Polr2bQ8CFI7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Polr2bQ8CFI7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
Polr2bQ8CFI7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Polr2bQ8CFI7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Polr2bQ8CFI7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.23■■□□□ 1.63
Polr2bQ8CFI7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.23■■□□□ 1.63
Polr2bQ8CFI7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Polr2bQ8CFI7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Polr2bQ8CFI7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
Polr2bQ8CFI7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Polr2bQ8CFI7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Polr2bQ8CFI7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Polr2bQ8CFI7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Polr2bQ8CFI7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Polr2bQ8CFI7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Polr2bQ8CFI7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Polr2bQ8CFI7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Polr2bQ8CFI7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Polr2bQ8CFI7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
Polr2bQ8CFI7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.14■■□□□ 1.62
Polr2bQ8CFI7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Polr2bQ8CFI7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Polr2bQ8CFI7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Polr2bQ8CFI7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Polr2bQ8CFI7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Polr2bQ8CFI7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.11■■□□□ 1.61
Polr2bQ8CFI7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Polr2bQ8CFI7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Polr2bQ8CFI7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Polr2bQ8CFI7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Polr2bQ8CFI7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Polr2bQ8CFI7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Polr2bQ8CFI7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.09■■□□□ 1.61
Polr2bQ8CFI7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Polr2bQ8CFI7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Polr2bQ8CFI7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Polr2bQ8CFI7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Polr2bQ8CFI7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Polr2bQ8CFI7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Polr2bQ8CFI7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Polr2bQ8CFI7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Polr2bQ8CFI7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Polr2bQ8CFI7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Polr2bQ8CFI7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Polr2bQ8CFI7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Polr2bQ8CFI7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Polr2bQ8CFI7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Polr2bQ8CFI7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Polr2bQ8CFI7 Gm37136-201ENSMUST00000194368 194 ntBASIC25.03■■□□□ 1.6
Polr2bQ8CFI7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Polr2bQ8CFI7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Polr2bQ8CFI7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Polr2bQ8CFI7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.01■■□□□ 1.59
Polr2bQ8CFI7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Polr2bQ8CFI7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25■■□□□ 1.59
Polr2bQ8CFI7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25■■□□□ 1.59
Polr2bQ8CFI7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25■■□□□ 1.59
Polr2bQ8CFI7 Gm37847-201ENSMUST00000192163 1497 ntBASIC25■■□□□ 1.59
Polr2bQ8CFI7 Gm31748-201ENSMUST00000194938 1497 ntBASIC25■■□□□ 1.59
Polr2bQ8CFI7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25■■□□□ 1.59
Polr2bQ8CFI7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Polr2bQ8CFI7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Polr2bQ8CFI7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Polr2bQ8CFI7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Polr2bQ8CFI7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Polr2bQ8CFI7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms