Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.06■■□□□ 1.6
Brat1Q8C3R1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Brat1Q8C3R1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Brat1Q8C3R1 Particl-201ENSMUST00000205370 1560 ntBASIC25.03■■□□□ 1.6
Brat1Q8C3R1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.03■■□□□ 1.6
Brat1Q8C3R1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Brat1Q8C3R1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Brat1Q8C3R1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Brat1Q8C3R1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.01■■□□□ 1.59
Brat1Q8C3R1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Brat1Q8C3R1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25■■□□□ 1.59
Brat1Q8C3R1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Brat1Q8C3R1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Brat1Q8C3R1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25■■□□□ 1.59
Brat1Q8C3R1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.99■■□□□ 1.59
Brat1Q8C3R1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.99■■□□□ 1.59
Brat1Q8C3R1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Brat1Q8C3R1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.98■■□□□ 1.59
Brat1Q8C3R1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.98■■□□□ 1.59
Brat1Q8C3R1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Brat1Q8C3R1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Brat1Q8C3R1 Gm11599-201ENSMUST00000118720 878 ntBASIC24.97■■□□□ 1.59
Brat1Q8C3R1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Brat1Q8C3R1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Brat1Q8C3R1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Brat1Q8C3R1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Brat1Q8C3R1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Brat1Q8C3R1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Brat1Q8C3R1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Brat1Q8C3R1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Brat1Q8C3R1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Brat1Q8C3R1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Brat1Q8C3R1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Brat1Q8C3R1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Brat1Q8C3R1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Brat1Q8C3R1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Brat1Q8C3R1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Brat1Q8C3R1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Brat1Q8C3R1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Brat1Q8C3R1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Brat1Q8C3R1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
Brat1Q8C3R1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Brat1Q8C3R1 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.83■■□□□ 1.57
Brat1Q8C3R1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Brat1Q8C3R1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Brat1Q8C3R1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.82■■□□□ 1.56
Brat1Q8C3R1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Brat1Q8C3R1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Brat1Q8C3R1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Brat1Q8C3R1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Brat1Q8C3R1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Brat1Q8C3R1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Brat1Q8C3R1 Gm37136-201ENSMUST00000194368 194 ntBASIC24.8■■□□□ 1.56
Brat1Q8C3R1 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.8■■□□□ 1.56
Brat1Q8C3R1 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.8■■□□□ 1.56
Brat1Q8C3R1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.8■■□□□ 1.56
Brat1Q8C3R1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Brat1Q8C3R1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Brat1Q8C3R1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Brat1Q8C3R1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.78■■□□□ 1.56
Brat1Q8C3R1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Brat1Q8C3R1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Brat1Q8C3R1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Brat1Q8C3R1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Brat1Q8C3R1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Brat1Q8C3R1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Brat1Q8C3R1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Brat1Q8C3R1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Brat1Q8C3R1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Brat1Q8C3R1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.74■■□□□ 1.55
Brat1Q8C3R1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Brat1Q8C3R1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Brat1Q8C3R1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Brat1Q8C3R1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Brat1Q8C3R1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Brat1Q8C3R1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Brat1Q8C3R1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Brat1Q8C3R1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Brat1Q8C3R1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Brat1Q8C3R1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.7■■□□□ 1.54
Brat1Q8C3R1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Brat1Q8C3R1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Brat1Q8C3R1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Brat1Q8C3R1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Brat1Q8C3R1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Brat1Q8C3R1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Brat1Q8C3R1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Brat1Q8C3R1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Brat1Q8C3R1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Brat1Q8C3R1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Brat1Q8C3R1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Brat1Q8C3R1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Brat1Q8C3R1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Brat1Q8C3R1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Brat1Q8C3R1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Brat1Q8C3R1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Brat1Q8C3R1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Brat1Q8C3R1 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.65■■□□□ 1.54
Brat1Q8C3R1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Brat1Q8C3R1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms