Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ska3Q8C263 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ska3Q8C263 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ska3Q8C263 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ska3Q8C263 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ska3Q8C263 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ska3Q8C263 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ska3Q8C263 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.14■■□□□ 1.13
Ska3Q8C263 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ska3Q8C263 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Ska3Q8C263 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ska3Q8C263 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.13■■□□□ 1.13
Ska3Q8C263 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ska3Q8C263 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ska3Q8C263 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ska3Q8C263 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.12■■□□□ 1.13
Ska3Q8C263 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ska3Q8C263 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.11■■□□□ 1.13
Ska3Q8C263 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ska3Q8C263 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.11■■□□□ 1.13
Ska3Q8C263 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ska3Q8C263 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.11■■□□□ 1.13
Ska3Q8C263 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.11■■□□□ 1.13
Ska3Q8C263 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ska3Q8C263 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ska3Q8C263 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ska3Q8C263 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ska3Q8C263 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ska3Q8C263 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ska3Q8C263 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ska3Q8C263 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.08■■□□□ 1.13
Ska3Q8C263 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ska3Q8C263 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Ska3Q8C263 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ska3Q8C263 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ska3Q8C263 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ska3Q8C263 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ska3Q8C263 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.05■■□□□ 1.12
Ska3Q8C263 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ska3Q8C263 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ska3Q8C263 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Ska3Q8C263 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ska3Q8C263 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ska3Q8C263 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ska3Q8C263 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ska3Q8C263 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ska3Q8C263 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ska3Q8C263 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ska3Q8C263 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.01■■□□□ 1.11
Ska3Q8C263 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ska3Q8C263 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ska3Q8C263 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Ska3Q8C263 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ska3Q8C263 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ska3Q8C263 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ska3Q8C263 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ska3Q8C263 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ska3Q8C263 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ska3Q8C263 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ska3Q8C263 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ska3Q8C263 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ska3Q8C263 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ska3Q8C263 Particl-201ENSMUST00000205370 1560 ntBASIC21.95■■□□□ 1.11
Ska3Q8C263 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ska3Q8C263 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ska3Q8C263 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ska3Q8C263 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ska3Q8C263 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ska3Q8C263 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ska3Q8C263 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.93■■□□□ 1.1
Ska3Q8C263 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.93■■□□□ 1.1
Ska3Q8C263 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ska3Q8C263 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Ska3Q8C263 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ska3Q8C263 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ska3Q8C263 Gm7432-201ENSMUST00000210343 879 ntBASIC21.91■■□□□ 1.1
Ska3Q8C263 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ska3Q8C263 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ska3Q8C263 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ska3Q8C263 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
Ska3Q8C263 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ska3Q8C263 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ska3Q8C263 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.89■■□□□ 1.09
Ska3Q8C263 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.89■■□□□ 1.09
Ska3Q8C263 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ska3Q8C263 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ska3Q8C263 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ska3Q8C263 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ska3Q8C263 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.87■■□□□ 1.09
Ska3Q8C263 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.87■■□□□ 1.09
Ska3Q8C263 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ska3Q8C263 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ska3Q8C263 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ska3Q8C263 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ska3Q8C263 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ska3Q8C263 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.84■■□□□ 1.09
Ska3Q8C263 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ska3Q8C263 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ska3Q8C263 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Ska3Q8C263 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms