Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd9Q8BYH8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd9Q8BYH8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.21■□□□□ 0.67
Chd9Q8BYH8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd9Q8BYH8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Chd9Q8BYH8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd9Q8BYH8 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.2■□□□□ 0.66
Chd9Q8BYH8 Gm45102-201ENSMUST00000207427 857 ntBASIC19.19■□□□□ 0.66
Chd9Q8BYH8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chd9Q8BYH8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd9Q8BYH8 Gm14523-201ENSMUST00000117260 558 ntBASIC19.17■□□□□ 0.66
Chd9Q8BYH8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Chd9Q8BYH8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd9Q8BYH8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chd9Q8BYH8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chd9Q8BYH8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Chd9Q8BYH8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.16■□□□□ 0.66
Chd9Q8BYH8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd9Q8BYH8 Gm27502-201ENSMUST00000183495 199 ntBASIC19.15■□□□□ 0.66
Chd9Q8BYH8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd9Q8BYH8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd9Q8BYH8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.15■□□□□ 0.66
Chd9Q8BYH8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.15■□□□□ 0.66
Chd9Q8BYH8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd9Q8BYH8 Gm14117-201ENSMUST00000122417 843 ntBASIC19.15■□□□□ 0.66
Chd9Q8BYH8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd9Q8BYH8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chd9Q8BYH8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.14■□□□□ 0.65
Chd9Q8BYH8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd9Q8BYH8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chd9Q8BYH8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.13■□□□□ 0.65
Chd9Q8BYH8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.12■□□□□ 0.65
Chd9Q8BYH8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd9Q8BYH8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd9Q8BYH8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd9Q8BYH8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.11■□□□□ 0.65
Chd9Q8BYH8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd9Q8BYH8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd9Q8BYH8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chd9Q8BYH8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd9Q8BYH8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd9Q8BYH8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd9Q8BYH8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd9Q8BYH8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chd9Q8BYH8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.09■□□□□ 0.65
Chd9Q8BYH8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.08■□□□□ 0.65
Chd9Q8BYH8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chd9Q8BYH8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chd9Q8BYH8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chd9Q8BYH8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chd9Q8BYH8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd9Q8BYH8 Gm10420-201ENSMUST00000121713 882 ntBASIC19.07■□□□□ 0.64
Chd9Q8BYH8 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.07■□□□□ 0.64
Chd9Q8BYH8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd9Q8BYH8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd9Q8BYH8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chd9Q8BYH8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd9Q8BYH8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd9Q8BYH8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.05■□□□□ 0.64
Chd9Q8BYH8 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.05■□□□□ 0.64
Chd9Q8BYH8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd9Q8BYH8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.03■□□□□ 0.64
Chd9Q8BYH8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd9Q8BYH8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chd9Q8BYH8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd9Q8BYH8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd9Q8BYH8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chd9Q8BYH8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Chd9Q8BYH8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd9Q8BYH8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd9Q8BYH8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd9Q8BYH8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd9Q8BYH8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd9Q8BYH8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chd9Q8BYH8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.01■□□□□ 0.63
Chd9Q8BYH8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.01■□□□□ 0.63
Chd9Q8BYH8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd9Q8BYH8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chd9Q8BYH8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd9Q8BYH8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19■□□□□ 0.63
Chd9Q8BYH8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd9Q8BYH8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd9Q8BYH8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.99■□□□□ 0.63
Chd9Q8BYH8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd9Q8BYH8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd9Q8BYH8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd9Q8BYH8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.98■□□□□ 0.63
Chd9Q8BYH8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd9Q8BYH8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd9Q8BYH8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd9Q8BYH8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd9Q8BYH8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Chd9Q8BYH8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd9Q8BYH8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd9Q8BYH8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Chd9Q8BYH8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.96■□□□□ 0.63
Chd9Q8BYH8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd9Q8BYH8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Chd9Q8BYH8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd9Q8BYH8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms