Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc30Q8BVF4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc30Q8BVF4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc30Q8BVF4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc30Q8BVF4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Ccdc30Q8BVF4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc30Q8BVF4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
Ccdc30Q8BVF4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Ccdc30Q8BVF4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.76■■■□□ 2.52
Ccdc30Q8BVF4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Ccdc30Q8BVF4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ccdc30Q8BVF4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.73■■■□□ 2.51
Ccdc30Q8BVF4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc30Q8BVF4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Ccdc30Q8BVF4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
Ccdc30Q8BVF4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.69■■■□□ 2.5
Ccdc30Q8BVF4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.69■■■□□ 2.5
Ccdc30Q8BVF4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.68■■■□□ 2.5
Ccdc30Q8BVF4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Ccdc30Q8BVF4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc30Q8BVF4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC30.65■■■□□ 2.5
Ccdc30Q8BVF4 Gm6821-201ENSMUST00000107540 542 ntBASIC30.65■■■□□ 2.5
Ccdc30Q8BVF4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc30Q8BVF4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc30Q8BVF4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc30Q8BVF4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc30Q8BVF4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc30Q8BVF4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc30Q8BVF4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc30Q8BVF4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc30Q8BVF4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
Ccdc30Q8BVF4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.61■■■□□ 2.49
Ccdc30Q8BVF4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Ccdc30Q8BVF4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC30.6■■■□□ 2.49
Ccdc30Q8BVF4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ccdc30Q8BVF4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc30Q8BVF4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.59■■■□□ 2.49
Ccdc30Q8BVF4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc30Q8BVF4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc30Q8BVF4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30.58■■■□□ 2.49
Ccdc30Q8BVF4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc30Q8BVF4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Ccdc30Q8BVF4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
Ccdc30Q8BVF4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
Ccdc30Q8BVF4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.57■■■□□ 2.48
Ccdc30Q8BVF4 Gm8503-201ENSMUST00000118131 455 ntBASIC30.55■■■□□ 2.48
Ccdc30Q8BVF4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.55■■■□□ 2.48
Ccdc30Q8BVF4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.55■■■□□ 2.48
Ccdc30Q8BVF4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Ccdc30Q8BVF4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc30Q8BVF4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.52■■■□□ 2.48
Ccdc30Q8BVF4 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.52■■■□□ 2.48
Ccdc30Q8BVF4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.51■■■□□ 2.47
Ccdc30Q8BVF4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
Ccdc30Q8BVF4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc30Q8BVF4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.49■■■□□ 2.47
Ccdc30Q8BVF4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc30Q8BVF4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC30.48■■■□□ 2.47
Ccdc30Q8BVF4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc30Q8BVF4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc30Q8BVF4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
Ccdc30Q8BVF4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc30Q8BVF4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC30.45■■■□□ 2.46
Ccdc30Q8BVF4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ccdc30Q8BVF4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
Ccdc30Q8BVF4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Ccdc30Q8BVF4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc30Q8BVF4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc30Q8BVF4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
Ccdc30Q8BVF4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
Ccdc30Q8BVF4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc30Q8BVF4 Particl-201ENSMUST00000205370 1560 ntBASIC30.4■■■□□ 2.46
Ccdc30Q8BVF4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc30Q8BVF4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ccdc30Q8BVF4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc30Q8BVF4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc30Q8BVF4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc30Q8BVF4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc30Q8BVF4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc30Q8BVF4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc30Q8BVF4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.36■■■□□ 2.45
Ccdc30Q8BVF4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc30Q8BVF4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc30Q8BVF4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ccdc30Q8BVF4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc30Q8BVF4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc30Q8BVF4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc30Q8BVF4 Gm14121-201ENSMUST00000121441 1380 ntBASIC30.3■■■□□ 2.44
Ccdc30Q8BVF4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc30Q8BVF4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Ccdc30Q8BVF4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc30Q8BVF4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc30Q8BVF4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc30Q8BVF4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms