Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lsm11Q8BUV6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm11Q8BUV6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm11Q8BUV6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm11Q8BUV6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm11Q8BUV6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm11Q8BUV6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Lsm11Q8BUV6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm11Q8BUV6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm11Q8BUV6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm11Q8BUV6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm11Q8BUV6 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.96■□□□□ 0.79
Lsm11Q8BUV6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm11Q8BUV6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm11Q8BUV6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.95■□□□□ 0.78
Lsm11Q8BUV6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm11Q8BUV6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm11Q8BUV6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm11Q8BUV6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm11Q8BUV6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm11Q8BUV6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm11Q8BUV6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm11Q8BUV6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm11Q8BUV6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm11Q8BUV6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm11Q8BUV6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm11Q8BUV6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm11Q8BUV6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm11Q8BUV6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm11Q8BUV6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm11Q8BUV6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm11Q8BUV6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm11Q8BUV6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm11Q8BUV6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.89■□□□□ 0.77
Lsm11Q8BUV6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm11Q8BUV6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm11Q8BUV6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm11Q8BUV6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Lsm11Q8BUV6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm11Q8BUV6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm11Q8BUV6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Lsm11Q8BUV6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm11Q8BUV6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm11Q8BUV6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm11Q8BUV6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm11Q8BUV6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Lsm11Q8BUV6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm11Q8BUV6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm11Q8BUV6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm11Q8BUV6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm11Q8BUV6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm11Q8BUV6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm11Q8BUV6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.86■□□□□ 0.77
Lsm11Q8BUV6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm11Q8BUV6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm11Q8BUV6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm11Q8BUV6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Lsm11Q8BUV6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Lsm11Q8BUV6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm11Q8BUV6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm11Q8BUV6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Lsm11Q8BUV6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm11Q8BUV6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm11Q8BUV6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm11Q8BUV6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm11Q8BUV6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm11Q8BUV6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm11Q8BUV6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm11Q8BUV6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm11Q8BUV6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm11Q8BUV6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm11Q8BUV6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.81■□□□□ 0.76
Lsm11Q8BUV6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Lsm11Q8BUV6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm11Q8BUV6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm11Q8BUV6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm11Q8BUV6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm11Q8BUV6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm11Q8BUV6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm11Q8BUV6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Lsm11Q8BUV6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm11Q8BUV6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm11Q8BUV6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.78■□□□□ 0.76
Lsm11Q8BUV6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Lsm11Q8BUV6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm11Q8BUV6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm11Q8BUV6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Lsm11Q8BUV6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm11Q8BUV6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm11Q8BUV6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.76■□□□□ 0.75
Lsm11Q8BUV6 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.76■□□□□ 0.75
Lsm11Q8BUV6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.76■□□□□ 0.75
Lsm11Q8BUV6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm11Q8BUV6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm11Q8BUV6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm11Q8BUV6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm11Q8BUV6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm11Q8BUV6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm11Q8BUV6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm11Q8BUV6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms