Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Tdp1Q8BJ37 Zxda-201ENSMUST00000117281 2621 ntBASIC26.57■■□□□ 1.84
Tdp1Q8BJ37 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Tdp1Q8BJ37 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Tdp1Q8BJ37 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.56■■□□□ 1.84
Tdp1Q8BJ37 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.55■■□□□ 1.84
Tdp1Q8BJ37 Scarna2-201ENSMUST00000157560 414 ntBASIC26.54■■□□□ 1.84
Tdp1Q8BJ37 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Tdp1Q8BJ37 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Tdp1Q8BJ37 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.53■■□□□ 1.84
Tdp1Q8BJ37 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.53■■□□□ 1.84
Tdp1Q8BJ37 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Tdp1Q8BJ37 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Tdp1Q8BJ37 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.52■■□□□ 1.84
Tdp1Q8BJ37 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Tdp1Q8BJ37 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.52■■□□□ 1.84
Tdp1Q8BJ37 Gm4799-201ENSMUST00000095396 657 ntBASIC26.52■■□□□ 1.84
Tdp1Q8BJ37 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Tdp1Q8BJ37 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.5■■□□□ 1.83
Tdp1Q8BJ37 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.5■■□□□ 1.83
Tdp1Q8BJ37 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Tdp1Q8BJ37 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Tdp1Q8BJ37 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Tdp1Q8BJ37 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tdp1Q8BJ37 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tdp1Q8BJ37 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tdp1Q8BJ37 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Tdp1Q8BJ37 Gm37136-201ENSMUST00000194368 194 ntBASIC26.47■■□□□ 1.83
Tdp1Q8BJ37 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Tdp1Q8BJ37 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Tdp1Q8BJ37 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.46■■□□□ 1.83
Tdp1Q8BJ37 Gm9806-201ENSMUST00000051080 552 ntBASIC26.46■■□□□ 1.83
Tdp1Q8BJ37 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.46■■□□□ 1.83
Tdp1Q8BJ37 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.46■■□□□ 1.83
Tdp1Q8BJ37 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Tdp1Q8BJ37 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Tdp1Q8BJ37 Mir3960-201ENSMUST00000198213 73 ntBASIC26.44■■□□□ 1.82
Tdp1Q8BJ37 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.44■■□□□ 1.82
Tdp1Q8BJ37 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Tdp1Q8BJ37 Gm11687-201ENSMUST00000118911 886 ntBASIC26.43■■□□□ 1.82
Tdp1Q8BJ37 Gm16437-201ENSMUST00000025669 507 ntBASIC26.43■■□□□ 1.82
Tdp1Q8BJ37 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Tdp1Q8BJ37 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Tdp1Q8BJ37 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Tdp1Q8BJ37 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Tdp1Q8BJ37 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.41■■□□□ 1.82
Tdp1Q8BJ37 Gm45364-201ENSMUST00000210883 159 ntBASIC26.41■■□□□ 1.82
Tdp1Q8BJ37 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.4■■□□□ 1.82
Tdp1Q8BJ37 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Tdp1Q8BJ37 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Tdp1Q8BJ37 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.39■■□□□ 1.82
Tdp1Q8BJ37 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Tdp1Q8BJ37 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Tdp1Q8BJ37 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Tdp1Q8BJ37 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.37■■□□□ 1.81
Tdp1Q8BJ37 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Tdp1Q8BJ37 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Tdp1Q8BJ37 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Tdp1Q8BJ37 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Gm12366-201ENSMUST00000121722 873 ntBASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Gm5786-201ENSMUST00000085368 882 ntBASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Tdp1Q8BJ37 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Tdp1Q8BJ37 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Tdp1Q8BJ37 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
Tdp1Q8BJ37 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Tdp1Q8BJ37 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.3■■□□□ 1.8
Tdp1Q8BJ37 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tdp1Q8BJ37 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Tdp1Q8BJ37 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tdp1Q8BJ37 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tdp1Q8BJ37 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Tdp1Q8BJ37 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tdp1Q8BJ37 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tdp1Q8BJ37 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tdp1Q8BJ37 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tdp1Q8BJ37 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.24■■□□□ 1.79
Tdp1Q8BJ37 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Tdp1Q8BJ37 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tdp1Q8BJ37 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.23■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms