Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Tdp1Q8BJ37 Zxda-201ENSMUST00000117281 2621 ntBASIC26.57■■□□□ 1.84
Tdp1Q8BJ37 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Tdp1Q8BJ37 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Tdp1Q8BJ37 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.56■■□□□ 1.84
Tdp1Q8BJ37 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.55■■□□□ 1.84
Tdp1Q8BJ37 Scarna2-201ENSMUST00000157560 414 ntBASIC26.54■■□□□ 1.84
Tdp1Q8BJ37 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Tdp1Q8BJ37 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Tdp1Q8BJ37 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.53■■□□□ 1.84
Tdp1Q8BJ37 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.53■■□□□ 1.84
Tdp1Q8BJ37 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Tdp1Q8BJ37 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Tdp1Q8BJ37 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.52■■□□□ 1.84
Tdp1Q8BJ37 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Tdp1Q8BJ37 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.52■■□□□ 1.84
Tdp1Q8BJ37 Gm4799-201ENSMUST00000095396 657 ntBASIC26.52■■□□□ 1.84
Tdp1Q8BJ37 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Tdp1Q8BJ37 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.5■■□□□ 1.83
Tdp1Q8BJ37 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.5■■□□□ 1.83
Tdp1Q8BJ37 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Tdp1Q8BJ37 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Tdp1Q8BJ37 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Tdp1Q8BJ37 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tdp1Q8BJ37 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tdp1Q8BJ37 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tdp1Q8BJ37 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Tdp1Q8BJ37 Gm37136-201ENSMUST00000194368 194 ntBASIC26.47■■□□□ 1.83
Tdp1Q8BJ37 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Tdp1Q8BJ37 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Tdp1Q8BJ37 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.46■■□□□ 1.83
Tdp1Q8BJ37 Gm9806-201ENSMUST00000051080 552 ntBASIC26.46■■□□□ 1.83
Tdp1Q8BJ37 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.46■■□□□ 1.83
Tdp1Q8BJ37 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.46■■□□□ 1.83
Tdp1Q8BJ37 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Tdp1Q8BJ37 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Tdp1Q8BJ37 Mir3960-201ENSMUST00000198213 73 ntBASIC26.44■■□□□ 1.82
Tdp1Q8BJ37 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.44■■□□□ 1.82
Tdp1Q8BJ37 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Tdp1Q8BJ37 Gm11687-201ENSMUST00000118911 886 ntBASIC26.43■■□□□ 1.82
Tdp1Q8BJ37 Gm16437-201ENSMUST00000025669 507 ntBASIC26.43■■□□□ 1.82
Tdp1Q8BJ37 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Tdp1Q8BJ37 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Tdp1Q8BJ37 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Tdp1Q8BJ37 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Tdp1Q8BJ37 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.41■■□□□ 1.82
Tdp1Q8BJ37 Gm45364-201ENSMUST00000210883 159 ntBASIC26.41■■□□□ 1.82
Tdp1Q8BJ37 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.4■■□□□ 1.82
Tdp1Q8BJ37 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Tdp1Q8BJ37 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Tdp1Q8BJ37 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.39■■□□□ 1.82
Tdp1Q8BJ37 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Tdp1Q8BJ37 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Tdp1Q8BJ37 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Tdp1Q8BJ37 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.37■■□□□ 1.81
Tdp1Q8BJ37 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Tdp1Q8BJ37 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Tdp1Q8BJ37 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Tdp1Q8BJ37 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Gm12366-201ENSMUST00000121722 873 ntBASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Gm5786-201ENSMUST00000085368 882 ntBASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Tdp1Q8BJ37 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Tdp1Q8BJ37 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Tdp1Q8BJ37 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Tdp1Q8BJ37 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
Tdp1Q8BJ37 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.31■■□□□ 1.8
Tdp1Q8BJ37 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Tdp1Q8BJ37 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.3■■□□□ 1.8
Tdp1Q8BJ37 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tdp1Q8BJ37 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Tdp1Q8BJ37 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tdp1Q8BJ37 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tdp1Q8BJ37 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Tdp1Q8BJ37 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tdp1Q8BJ37 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tdp1Q8BJ37 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tdp1Q8BJ37 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tdp1Q8BJ37 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
Tdp1Q8BJ37 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.24■■□□□ 1.79
Tdp1Q8BJ37 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Tdp1Q8BJ37 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tdp1Q8BJ37 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.23■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms