Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh20Q8BIZ0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh20Q8BIZ0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Pcdh20Q8BIZ0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh20Q8BIZ0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh20Q8BIZ0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh20Q8BIZ0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.75■■□□□ 1.23
Pcdh20Q8BIZ0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh20Q8BIZ0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh20Q8BIZ0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh20Q8BIZ0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Pcdh20Q8BIZ0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh20Q8BIZ0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh20Q8BIZ0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh20Q8BIZ0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh20Q8BIZ0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh20Q8BIZ0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh20Q8BIZ0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh20Q8BIZ0 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.71■■□□□ 1.23
Pcdh20Q8BIZ0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh20Q8BIZ0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.71■■□□□ 1.23
Pcdh20Q8BIZ0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.7■■□□□ 1.22
Pcdh20Q8BIZ0 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.7■■□□□ 1.22
Pcdh20Q8BIZ0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.7■■□□□ 1.22
Pcdh20Q8BIZ0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdh20Q8BIZ0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdh20Q8BIZ0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh20Q8BIZ0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh20Q8BIZ0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh20Q8BIZ0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh20Q8BIZ0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Pcdh20Q8BIZ0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh20Q8BIZ0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh20Q8BIZ0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh20Q8BIZ0 Nkain2-201ENSMUST00000092602 558 ntBASIC22.68■■□□□ 1.22
Pcdh20Q8BIZ0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh20Q8BIZ0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh20Q8BIZ0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh20Q8BIZ0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh20Q8BIZ0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh20Q8BIZ0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh20Q8BIZ0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh20Q8BIZ0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh20Q8BIZ0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh20Q8BIZ0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Pcdh20Q8BIZ0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh20Q8BIZ0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh20Q8BIZ0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh20Q8BIZ0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh20Q8BIZ0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdh20Q8BIZ0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdh20Q8BIZ0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh20Q8BIZ0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
Pcdh20Q8BIZ0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh20Q8BIZ0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh20Q8BIZ0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh20Q8BIZ0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh20Q8BIZ0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.63■■□□□ 1.21
Pcdh20Q8BIZ0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh20Q8BIZ0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh20Q8BIZ0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh20Q8BIZ0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh20Q8BIZ0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Pcdh20Q8BIZ0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.62■■□□□ 1.21
Pcdh20Q8BIZ0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh20Q8BIZ0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh20Q8BIZ0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.6■■□□□ 1.21
Pcdh20Q8BIZ0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.6■■□□□ 1.21
Pcdh20Q8BIZ0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh20Q8BIZ0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdh20Q8BIZ0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdh20Q8BIZ0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh20Q8BIZ0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Pcdh20Q8BIZ0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh20Q8BIZ0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh20Q8BIZ0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh20Q8BIZ0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh20Q8BIZ0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh20Q8BIZ0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Pcdh20Q8BIZ0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh20Q8BIZ0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Pcdh20Q8BIZ0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.53■■□□□ 1.2
Pcdh20Q8BIZ0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.52■■□□□ 1.2
Pcdh20Q8BIZ0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh20Q8BIZ0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh20Q8BIZ0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh20Q8BIZ0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh20Q8BIZ0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.51■■□□□ 1.19
Pcdh20Q8BIZ0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Pcdh20Q8BIZ0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh20Q8BIZ0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh20Q8BIZ0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh20Q8BIZ0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh20Q8BIZ0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh20Q8BIZ0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Pcdh20Q8BIZ0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdh20Q8BIZ0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.48■■□□□ 1.19
Pcdh20Q8BIZ0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
Pcdh20Q8BIZ0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdh20Q8BIZ0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms