Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scn3bQ8BHK2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn3bQ8BHK2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Scn3bQ8BHK2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Scn3bQ8BHK2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn3bQ8BHK2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn3bQ8BHK2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn3bQ8BHK2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn3bQ8BHK2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scn3bQ8BHK2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn3bQ8BHK2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.82■■□□□ 1.08
Scn3bQ8BHK2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn3bQ8BHK2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn3bQ8BHK2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.82■■□□□ 1.08
Scn3bQ8BHK2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Scn3bQ8BHK2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scn3bQ8BHK2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn3bQ8BHK2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn3bQ8BHK2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn3bQ8BHK2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Scn3bQ8BHK2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn3bQ8BHK2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn3bQ8BHK2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn3bQ8BHK2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn3bQ8BHK2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn3bQ8BHK2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scn3bQ8BHK2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn3bQ8BHK2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Scn3bQ8BHK2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Scn3bQ8BHK2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scn3bQ8BHK2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn3bQ8BHK2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn3bQ8BHK2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn3bQ8BHK2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn3bQ8BHK2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn3bQ8BHK2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn3bQ8BHK2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn3bQ8BHK2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Scn3bQ8BHK2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn3bQ8BHK2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scn3bQ8BHK2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Scn3bQ8BHK2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn3bQ8BHK2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scn3bQ8BHK2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Scn3bQ8BHK2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn3bQ8BHK2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn3bQ8BHK2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn3bQ8BHK2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn3bQ8BHK2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.68■■□□□ 1.06
Scn3bQ8BHK2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Scn3bQ8BHK2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.67■■□□□ 1.06
Scn3bQ8BHK2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Scn3bQ8BHK2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Scn3bQ8BHK2 Gm26115-201ENSMUST00000175605 87 ntBASIC21.66■■□□□ 1.06
Scn3bQ8BHK2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn3bQ8BHK2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Scn3bQ8BHK2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Scn3bQ8BHK2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Scn3bQ8BHK2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Scn3bQ8BHK2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scn3bQ8BHK2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn3bQ8BHK2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scn3bQ8BHK2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scn3bQ8BHK2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.64■■□□□ 1.05
Scn3bQ8BHK2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn3bQ8BHK2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn3bQ8BHK2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scn3bQ8BHK2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn3bQ8BHK2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Scn3bQ8BHK2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.63■■□□□ 1.05
Scn3bQ8BHK2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn3bQ8BHK2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scn3bQ8BHK2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn3bQ8BHK2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn3bQ8BHK2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Scn3bQ8BHK2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn3bQ8BHK2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn3bQ8BHK2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn3bQ8BHK2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Scn3bQ8BHK2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn3bQ8BHK2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn3bQ8BHK2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scn3bQ8BHK2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn3bQ8BHK2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn3bQ8BHK2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn3bQ8BHK2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn3bQ8BHK2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn3bQ8BHK2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn3bQ8BHK2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn3bQ8BHK2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Scn3bQ8BHK2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
Scn3bQ8BHK2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scn3bQ8BHK2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Scn3bQ8BHK2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn3bQ8BHK2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn3bQ8BHK2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn3bQ8BHK2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn3bQ8BHK2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn3bQ8BHK2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.55■■□□□ 1.04
Scn3bQ8BHK2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms