Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3hc1Q80YV2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3hc1Q80YV2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3hc1Q80YV2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3hc1Q80YV2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3hc1Q80YV2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3hc1Q80YV2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3hc1Q80YV2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3hc1Q80YV2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Zc3hc1Q80YV2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Zc3hc1Q80YV2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3hc1Q80YV2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3hc1Q80YV2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3hc1Q80YV2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3hc1Q80YV2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3hc1Q80YV2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3hc1Q80YV2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3hc1Q80YV2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3hc1Q80YV2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.4■■□□□ 1.02
Zc3hc1Q80YV2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3hc1Q80YV2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3hc1Q80YV2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3hc1Q80YV2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zc3hc1Q80YV2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Zc3hc1Q80YV2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zc3hc1Q80YV2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Zc3hc1Q80YV2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.38■■□□□ 1.01
Zc3hc1Q80YV2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Zc3hc1Q80YV2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zc3hc1Q80YV2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Zc3hc1Q80YV2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zc3hc1Q80YV2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Zc3hc1Q80YV2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zc3hc1Q80YV2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zc3hc1Q80YV2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Zc3hc1Q80YV2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3hc1Q80YV2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.36■■□□□ 1.01
Zc3hc1Q80YV2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3hc1Q80YV2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3hc1Q80YV2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3hc1Q80YV2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3hc1Q80YV2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3hc1Q80YV2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Zc3hc1Q80YV2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Zc3hc1Q80YV2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zc3hc1Q80YV2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Zc3hc1Q80YV2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.33■■□□□ 1.01
Zc3hc1Q80YV2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3hc1Q80YV2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.33■■□□□ 1.01
Zc3hc1Q80YV2 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.33■■□□□ 1.01
Zc3hc1Q80YV2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Zc3hc1Q80YV2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Zc3hc1Q80YV2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.33■■□□□ 1
Zc3hc1Q80YV2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3hc1Q80YV2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3hc1Q80YV2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3hc1Q80YV2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3hc1Q80YV2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Zc3hc1Q80YV2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3hc1Q80YV2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zc3hc1Q80YV2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Zc3hc1Q80YV2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Zc3hc1Q80YV2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zc3hc1Q80YV2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3hc1Q80YV2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3hc1Q80YV2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Zc3hc1Q80YV2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zc3hc1Q80YV2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zc3hc1Q80YV2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Zc3hc1Q80YV2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3hc1Q80YV2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zc3hc1Q80YV2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.29■■□□□ 1
Zc3hc1Q80YV2 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.29■■□□□ 1
Zc3hc1Q80YV2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.29■■□□□ 1
Zc3hc1Q80YV2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3hc1Q80YV2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3hc1Q80YV2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3hc1Q80YV2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3hc1Q80YV2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3hc1Q80YV2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3hc1Q80YV2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Zc3hc1Q80YV2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.27■■□□□ 1
Zc3hc1Q80YV2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3hc1Q80YV2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3hc1Q80YV2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3hc1Q80YV2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Zc3hc1Q80YV2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.25■□□□□ 0.99
Zc3hc1Q80YV2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3hc1Q80YV2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.24■□□□□ 0.99
Zc3hc1Q80YV2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3hc1Q80YV2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3hc1Q80YV2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3hc1Q80YV2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.22■□□□□ 0.99
Zc3hc1Q80YV2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3hc1Q80YV2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3hc1Q80YV2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3hc1Q80YV2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.21■□□□□ 0.99
Zc3hc1Q80YV2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3hc1Q80YV2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3hc1Q80YV2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms