Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Gm12366-201ENSMUST00000121722 873 ntBASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Gm5786-201ENSMUST00000085368 882 ntBASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Prpf40bQ80W14 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.2■■□□□ 1.95
Prpf40bQ80W14 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Prpf40bQ80W14 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Prpf40bQ80W14 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.2■■□□□ 1.94
Prpf40bQ80W14 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Prpf40bQ80W14 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Scarna2-201ENSMUST00000157560 414 ntBASIC27.18■■□□□ 1.94
Prpf40bQ80W14 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Prpf40bQ80W14 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.17■■□□□ 1.94
Prpf40bQ80W14 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Prpf40bQ80W14 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Prpf40bQ80W14 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Prpf40bQ80W14 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Prpf40bQ80W14 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Prpf40bQ80W14 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Prpf40bQ80W14 Gm11687-201ENSMUST00000118911 886 ntBASIC27.12■■□□□ 1.93
Prpf40bQ80W14 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.12■■□□□ 1.93
Prpf40bQ80W14 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Prpf40bQ80W14 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.11■■□□□ 1.93
Prpf40bQ80W14 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Prpf40bQ80W14 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Prpf40bQ80W14 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Prpf40bQ80W14 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Prpf40bQ80W14 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Prpf40bQ80W14 Particl-201ENSMUST00000205370 1560 ntBASIC27.09■■□□□ 1.93
Prpf40bQ80W14 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Gm9806-201ENSMUST00000051080 552 ntBASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Gm4799-201ENSMUST00000095396 657 ntBASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Prpf40bQ80W14 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Prpf40bQ80W14 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Prpf40bQ80W14 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf40bQ80W14 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf40bQ80W14 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf40bQ80W14 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf40bQ80W14 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf40bQ80W14 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Prpf40bQ80W14 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Prpf40bQ80W14 Gm16437-201ENSMUST00000025669 507 ntBASIC27.03■■□□□ 1.92
Prpf40bQ80W14 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Prpf40bQ80W14 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Prpf40bQ80W14 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.02■■□□□ 1.92
Prpf40bQ80W14 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Prpf40bQ80W14 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Prpf40bQ80W14 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
Prpf40bQ80W14 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.01■■□□□ 1.92
Prpf40bQ80W14 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Prpf40bQ80W14 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Prpf40bQ80W14 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Prpf40bQ80W14 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
Prpf40bQ80W14 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27■■□□□ 1.91
Prpf40bQ80W14 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27■■□□□ 1.91
Prpf40bQ80W14 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Prpf40bQ80W14 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.99■■□□□ 1.91
Prpf40bQ80W14 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
Prpf40bQ80W14 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.98■■□□□ 1.91
Prpf40bQ80W14 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Prpf40bQ80W14 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Prpf40bQ80W14 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.97■■□□□ 1.91
Prpf40bQ80W14 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Prpf40bQ80W14 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Prpf40bQ80W14 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
Prpf40bQ80W14 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Prpf40bQ80W14 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Prpf40bQ80W14 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Prpf40bQ80W14 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Prpf40bQ80W14 Gm7332-201ENSMUST00000118351 454 ntBASIC26.94■■□□□ 1.9
Prpf40bQ80W14 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Prpf40bQ80W14 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Prpf40bQ80W14 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.93■■□□□ 1.9
Prpf40bQ80W14 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Prpf40bQ80W14 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.92■■□□□ 1.9
Prpf40bQ80W14 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Prpf40bQ80W14 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Prpf40bQ80W14 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Prpf40bQ80W14 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.9■■□□□ 1.9
Prpf40bQ80W14 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms