Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rpp38Q80UU2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rpp38Q80UU2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rpp38Q80UU2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Rpp38Q80UU2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rpp38Q80UU2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rpp38Q80UU2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Rpp38Q80UU2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Rpp38Q80UU2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.77■■□□□ 1.4
Rpp38Q80UU2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rpp38Q80UU2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rpp38Q80UU2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.77■■□□□ 1.4
Rpp38Q80UU2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rpp38Q80UU2 Gm6821-201ENSMUST00000107540 542 ntBASIC23.75■■□□□ 1.39
Rpp38Q80UU2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.74■■□□□ 1.39
Rpp38Q80UU2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.74■■□□□ 1.39
Rpp38Q80UU2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpp38Q80UU2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpp38Q80UU2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpp38Q80UU2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rpp38Q80UU2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.72■■□□□ 1.39
Rpp38Q80UU2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpp38Q80UU2 Gm8503-201ENSMUST00000118131 455 ntBASIC23.71■■□□□ 1.39
Rpp38Q80UU2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rpp38Q80UU2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.71■■□□□ 1.39
Rpp38Q80UU2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.7■■□□□ 1.38
Rpp38Q80UU2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpp38Q80UU2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpp38Q80UU2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Rpp38Q80UU2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.69■■□□□ 1.38
Rpp38Q80UU2 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.68■■□□□ 1.38
Rpp38Q80UU2 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.68■■□□□ 1.38
Rpp38Q80UU2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.68■■□□□ 1.38
Rpp38Q80UU2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpp38Q80UU2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp38Q80UU2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp38Q80UU2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.67■■□□□ 1.38
Rpp38Q80UU2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Rpp38Q80UU2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpp38Q80UU2 Particl-201ENSMUST00000205370 1560 ntBASIC23.65■■□□□ 1.38
Rpp38Q80UU2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.65■■□□□ 1.38
Rpp38Q80UU2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpp38Q80UU2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Rpp38Q80UU2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpp38Q80UU2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpp38Q80UU2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rpp38Q80UU2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rpp38Q80UU2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rpp38Q80UU2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.62■■□□□ 1.37
Rpp38Q80UU2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpp38Q80UU2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rpp38Q80UU2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Rpp38Q80UU2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Rpp38Q80UU2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpp38Q80UU2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rpp38Q80UU2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpp38Q80UU2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Rpp38Q80UU2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Rpp38Q80UU2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpp38Q80UU2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rpp38Q80UU2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.59■■□□□ 1.37
Rpp38Q80UU2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.58■■□□□ 1.37
Rpp38Q80UU2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpp38Q80UU2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpp38Q80UU2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.56■■□□□ 1.36
Rpp38Q80UU2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Rpp38Q80UU2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Rpp38Q80UU2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
Rpp38Q80UU2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rpp38Q80UU2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
Rpp38Q80UU2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpp38Q80UU2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Rpp38Q80UU2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpp38Q80UU2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Rpp38Q80UU2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpp38Q80UU2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Rpp38Q80UU2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rpp38Q80UU2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rpp38Q80UU2 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.52■■□□□ 1.36
Rpp38Q80UU2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Rpp38Q80UU2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rpp38Q80UU2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpp38Q80UU2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Rpp38Q80UU2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpp38Q80UU2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpp38Q80UU2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpp38Q80UU2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpp38Q80UU2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rpp38Q80UU2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
Rpp38Q80UU2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rpp38Q80UU2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpp38Q80UU2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpp38Q80UU2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Rpp38Q80UU2 Gm37136-201ENSMUST00000194368 194 ntBASIC23.47■■□□□ 1.35
Rpp38Q80UU2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rpp38Q80UU2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rpp38Q80UU2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rpp38Q80UU2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.45■■□□□ 1.35
Rpp38Q80UU2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rpp38Q80UU2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms