Protein–RNA interactions for Protein: Q6PGE7

Slc6a7, Sodium-dependent proline transporter, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a7Q6PGE7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a7Q6PGE7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a7Q6PGE7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a7Q6PGE7 Gm6821-201ENSMUST00000107540 542 ntBASIC21.24■□□□□ 0.99
Slc6a7Q6PGE7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a7Q6PGE7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a7Q6PGE7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a7Q6PGE7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a7Q6PGE7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a7Q6PGE7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a7Q6PGE7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a7Q6PGE7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a7Q6PGE7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a7Q6PGE7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.22■□□□□ 0.99
Slc6a7Q6PGE7 Gm8503-201ENSMUST00000118131 455 ntBASIC21.21■□□□□ 0.99
Slc6a7Q6PGE7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Slc6a7Q6PGE7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Slc6a7Q6PGE7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a7Q6PGE7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a7Q6PGE7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a7Q6PGE7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a7Q6PGE7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a7Q6PGE7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.19■□□□□ 0.98
Slc6a7Q6PGE7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a7Q6PGE7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.18■□□□□ 0.98
Slc6a7Q6PGE7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a7Q6PGE7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a7Q6PGE7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Slc6a7Q6PGE7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a7Q6PGE7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a7Q6PGE7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a7Q6PGE7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a7Q6PGE7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a7Q6PGE7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a7Q6PGE7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a7Q6PGE7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a7Q6PGE7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.15■□□□□ 0.98
Slc6a7Q6PGE7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Slc6a7Q6PGE7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a7Q6PGE7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a7Q6PGE7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a7Q6PGE7 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.14■□□□□ 0.97
Slc6a7Q6PGE7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a7Q6PGE7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a7Q6PGE7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Slc6a7Q6PGE7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a7Q6PGE7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a7Q6PGE7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a7Q6PGE7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.1■□□□□ 0.97
Slc6a7Q6PGE7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a7Q6PGE7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a7Q6PGE7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.09■□□□□ 0.97
Slc6a7Q6PGE7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a7Q6PGE7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a7Q6PGE7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a7Q6PGE7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a7Q6PGE7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Slc6a7Q6PGE7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a7Q6PGE7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Slc6a7Q6PGE7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a7Q6PGE7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a7Q6PGE7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Slc6a7Q6PGE7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a7Q6PGE7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a7Q6PGE7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a7Q6PGE7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a7Q6PGE7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a7Q6PGE7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a7Q6PGE7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a7Q6PGE7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a7Q6PGE7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a7Q6PGE7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Slc6a7Q6PGE7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a7Q6PGE7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Slc6a7Q6PGE7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a7Q6PGE7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a7Q6PGE7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Slc6a7Q6PGE7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.04■□□□□ 0.96
Slc6a7Q6PGE7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a7Q6PGE7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Slc6a7Q6PGE7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a7Q6PGE7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.02■□□□□ 0.96
Slc6a7Q6PGE7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a7Q6PGE7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a7Q6PGE7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a7Q6PGE7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a7Q6PGE7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a7Q6PGE7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a7Q6PGE7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc6a7Q6PGE7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc6a7Q6PGE7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slc6a7Q6PGE7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21■□□□□ 0.95
Slc6a7Q6PGE7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Slc6a7Q6PGE7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a7Q6PGE7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a7Q6PGE7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a7Q6PGE7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a7Q6PGE7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a7Q6PGE7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a7Q6PGE7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms