Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.48■□□□□ 0.71
Commd3Q63829 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Commd3Q63829 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Commd3Q63829 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.48■□□□□ 0.71
Commd3Q63829 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Commd3Q63829 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Commd3Q63829 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Commd3Q63829 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Commd3Q63829 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Commd3Q63829 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Commd3Q63829 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.46■□□□□ 0.71
Commd3Q63829 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Commd3Q63829 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Commd3Q63829 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Commd3Q63829 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Commd3Q63829 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Commd3Q63829 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Commd3Q63829 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Commd3Q63829 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Commd3Q63829 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Commd3Q63829 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Commd3Q63829 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Commd3Q63829 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Commd3Q63829 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Commd3Q63829 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Commd3Q63829 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Commd3Q63829 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Commd3Q63829 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Commd3Q63829 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Commd3Q63829 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Commd3Q63829 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Commd3Q63829 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Commd3Q63829 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Commd3Q63829 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Commd3Q63829 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Commd3Q63829 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Commd3Q63829 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Commd3Q63829 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Commd3Q63829 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Commd3Q63829 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Commd3Q63829 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Commd3Q63829 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Commd3Q63829 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Commd3Q63829 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Commd3Q63829 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Commd3Q63829 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Commd3Q63829 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Commd3Q63829 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Commd3Q63829 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Commd3Q63829 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Commd3Q63829 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Commd3Q63829 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Commd3Q63829 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Commd3Q63829 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Commd3Q63829 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Commd3Q63829 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Commd3Q63829 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Commd3Q63829 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.36■□□□□ 0.69
Commd3Q63829 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Commd3Q63829 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Commd3Q63829 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Commd3Q63829 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Commd3Q63829 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Commd3Q63829 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Commd3Q63829 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Commd3Q63829 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Commd3Q63829 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Commd3Q63829 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Commd3Q63829 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Commd3Q63829 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Commd3Q63829 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Commd3Q63829 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Commd3Q63829 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Commd3Q63829 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Commd3Q63829 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Commd3Q63829 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Commd3Q63829 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Commd3Q63829 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Commd3Q63829 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Commd3Q63829 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Commd3Q63829 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Commd3Q63829 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Commd3Q63829 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Commd3Q63829 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Commd3Q63829 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Commd3Q63829 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Commd3Q63829 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Commd3Q63829 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Commd3Q63829 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Commd3Q63829 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Commd3Q63829 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Commd3Q63829 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Commd3Q63829 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Commd3Q63829 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Commd3Q63829 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Commd3Q63829 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Commd3Q63829 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Commd3Q63829 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Commd3Q63829 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.28■□□□□ 0.68
Commd3Q63829 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms