Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.03■□□□□ 0.32
Ndufa4Q62425 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufa4Q62425 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufa4Q62425 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ndufa4Q62425 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ndufa4Q62425 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Ndufa4Q62425 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.02■□□□□ 0.32
Ndufa4Q62425 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ndufa4Q62425 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ndufa4Q62425 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufa4Q62425 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufa4Q62425 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufa4Q62425 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndufa4Q62425 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ndufa4Q62425 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndufa4Q62425 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndufa4Q62425 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndufa4Q62425 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndufa4Q62425 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndufa4Q62425 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ndufa4Q62425 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndufa4Q62425 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ndufa4Q62425 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ndufa4Q62425 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndufa4Q62425 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Ndufa4Q62425 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ndufa4Q62425 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ndufa4Q62425 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndufa4Q62425 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.95■□□□□ 0.3
Ndufa4Q62425 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.95■□□□□ 0.3
Ndufa4Q62425 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
Ndufa4Q62425 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndufa4Q62425 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndufa4Q62425 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ndufa4Q62425 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ndufa4Q62425 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndufa4Q62425 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ndufa4Q62425 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndufa4Q62425 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndufa4Q62425 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.93■□□□□ 0.3
Ndufa4Q62425 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ndufa4Q62425 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndufa4Q62425 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Ndufa4Q62425 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ndufa4Q62425 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndufa4Q62425 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.92■□□□□ 0.3
Ndufa4Q62425 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ndufa4Q62425 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndufa4Q62425 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ndufa4Q62425 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ndufa4Q62425 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndufa4Q62425 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndufa4Q62425 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndufa4Q62425 Gm26115-201ENSMUST00000175605 87 ntBASIC16.91■□□□□ 0.3
Ndufa4Q62425 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndufa4Q62425 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndufa4Q62425 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ndufa4Q62425 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ndufa4Q62425 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ndufa4Q62425 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ndufa4Q62425 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.9■□□□□ 0.3
Ndufa4Q62425 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ndufa4Q62425 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ndufa4Q62425 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndufa4Q62425 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ndufa4Q62425 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Ndufa4Q62425 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ndufa4Q62425 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa4Q62425 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa4Q62425 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa4Q62425 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa4Q62425 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa4Q62425 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa4Q62425 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ndufa4Q62425 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa4Q62425 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa4Q62425 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa4Q62425 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa4Q62425 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Ndufa4Q62425 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Ndufa4Q62425 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa4Q62425 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa4Q62425 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndufa4Q62425 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndufa4Q62425 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndufa4Q62425 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndufa4Q62425 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndufa4Q62425 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndufa4Q62425 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ndufa4Q62425 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndufa4Q62425 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndufa4Q62425 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ndufa4Q62425 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ndufa4Q62425 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa4Q62425 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa4Q62425 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ndufa4Q62425 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa4Q62425 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa4Q62425 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.82■□□□□ 0.28
Ndufa4Q62425 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms