Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.49■■□□□ 1.35
Rai1Q61818 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rai1Q61818 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rai1Q61818 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.49■■□□□ 1.35
Rai1Q61818 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Rai1Q61818 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rai1Q61818 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rai1Q61818 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rai1Q61818 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rai1Q61818 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rai1Q61818 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.47■■□□□ 1.35
Rai1Q61818 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.46■■□□□ 1.35
Rai1Q61818 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rai1Q61818 Gm45364-201ENSMUST00000210883 159 ntBASIC23.45■■□□□ 1.35
Rai1Q61818 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Rai1Q61818 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Rai1Q61818 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.45■■□□□ 1.34
Rai1Q61818 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rai1Q61818 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rai1Q61818 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.45■■□□□ 1.34
Rai1Q61818 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rai1Q61818 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rai1Q61818 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rai1Q61818 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.42■■□□□ 1.34
Rai1Q61818 Gm11687-201ENSMUST00000118911 886 ntBASIC23.42■■□□□ 1.34
Rai1Q61818 Scarna2-201ENSMUST00000157560 414 ntBASIC23.42■■□□□ 1.34
Rai1Q61818 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rai1Q61818 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rai1Q61818 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.41■■□□□ 1.34
Rai1Q61818 Gm9806-201ENSMUST00000051080 552 ntBASIC23.41■■□□□ 1.34
Rai1Q61818 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rai1Q61818 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.41■■□□□ 1.34
Rai1Q61818 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Rai1Q61818 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.4■■□□□ 1.34
Rai1Q61818 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Rai1Q61818 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.39■■□□□ 1.33
Rai1Q61818 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.39■■□□□ 1.33
Rai1Q61818 Gm4799-201ENSMUST00000095396 657 ntBASIC23.39■■□□□ 1.33
Rai1Q61818 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rai1Q61818 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.38■■□□□ 1.33
Rai1Q61818 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rai1Q61818 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rai1Q61818 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rai1Q61818 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rai1Q61818 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rai1Q61818 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.36■■□□□ 1.33
Rai1Q61818 Gm12366-201ENSMUST00000121722 873 ntBASIC23.36■■□□□ 1.33
Rai1Q61818 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.36■■□□□ 1.33
Rai1Q61818 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.36■■□□□ 1.33
Rai1Q61818 Gm5786-201ENSMUST00000085368 882 ntBASIC23.36■■□□□ 1.33
Rai1Q61818 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.36■■□□□ 1.33
Rai1Q61818 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.36■■□□□ 1.33
Rai1Q61818 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rai1Q61818 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rai1Q61818 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rai1Q61818 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rai1Q61818 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rai1Q61818 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rai1Q61818 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.34■■□□□ 1.33
Rai1Q61818 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rai1Q61818 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.33■■□□□ 1.33
Rai1Q61818 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rai1Q61818 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Rai1Q61818 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rai1Q61818 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rai1Q61818 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rai1Q61818 Gm37136-201ENSMUST00000194368 194 ntBASIC23.3■■□□□ 1.32
Rai1Q61818 Mir3960-201ENSMUST00000198213 73 ntBASIC23.3■■□□□ 1.32
Rai1Q61818 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.3■■□□□ 1.32
Rai1Q61818 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rai1Q61818 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rai1Q61818 Zxda-201ENSMUST00000117281 2621 ntBASIC23.27■■□□□ 1.32
Rai1Q61818 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Rai1Q61818 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rai1Q61818 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
Rai1Q61818 Gm16437-201ENSMUST00000025669 507 ntBASIC23.26■■□□□ 1.31
Rai1Q61818 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rai1Q61818 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Rai1Q61818 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rai1Q61818 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rai1Q61818 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
Rai1Q61818 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.25■■□□□ 1.31
Rai1Q61818 Gm27502-201ENSMUST00000183495 199 ntBASIC23.24■■□□□ 1.31
Rai1Q61818 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rai1Q61818 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rai1Q61818 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rai1Q61818 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Rai1Q61818 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Rai1Q61818 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.19■■□□□ 1.3
Rai1Q61818 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rai1Q61818 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rai1Q61818 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rai1Q61818 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.18■■□□□ 1.3
Rai1Q61818 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rai1Q61818 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
Rai1Q61818 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rai1Q61818 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rai1Q61818 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rai1Q61818 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rai1Q61818 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms