Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Foxn1Q61575 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Foxn1Q61575 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Foxn1Q61575 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Foxn1Q61575 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Foxn1Q61575 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.72■■■□□ 2.03
Foxn1Q61575 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Foxn1Q61575 Gm45364-201ENSMUST00000210883 159 ntBASIC27.72■■■□□ 2.03
Foxn1Q61575 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Foxn1Q61575 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Foxn1Q61575 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
Foxn1Q61575 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Foxn1Q61575 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Foxn1Q61575 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Foxn1Q61575 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Foxn1Q61575 Gm15546-201ENSMUST00000122095 826 ntBASIC27.69■■■□□ 2.02
Foxn1Q61575 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Foxn1Q61575 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Foxn1Q61575 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC27.66■■■□□ 2.02
Foxn1Q61575 Gm5921-201ENSMUST00000075898 882 ntBASIC27.66■■■□□ 2.02
Foxn1Q61575 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Foxn1Q61575 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.65■■■□□ 2.02
Foxn1Q61575 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Foxn1Q61575 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Foxn1Q61575 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Foxn1Q61575 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Foxn1Q61575 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC27.64■■■□□ 2.02
Foxn1Q61575 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
Foxn1Q61575 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Foxn1Q61575 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Foxn1Q61575 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
Foxn1Q61575 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Foxn1Q61575 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Foxn1Q61575 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Foxn1Q61575 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC27.61■■■□□ 2.01
Foxn1Q61575 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Foxn1Q61575 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Foxn1Q61575 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.59■■■□□ 2.01
Foxn1Q61575 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Foxn1Q61575 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Foxn1Q61575 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.58■■■□□ 2.01
Foxn1Q61575 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Foxn1Q61575 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.57■■■□□ 2
Foxn1Q61575 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.57■■■□□ 2
Foxn1Q61575 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.56■■■□□ 2
Foxn1Q61575 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.56■■■□□ 2
Foxn1Q61575 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Foxn1Q61575 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.55■■■□□ 2
Foxn1Q61575 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC27.54■■■□□ 2
Foxn1Q61575 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Foxn1Q61575 Gm10420-201ENSMUST00000121713 882 ntBASIC27.53■■■□□ 2
Foxn1Q61575 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Foxn1Q61575 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Foxn1Q61575 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
Foxn1Q61575 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.5■■□□□ 1.99
Foxn1Q61575 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Foxn1Q61575 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.49■■□□□ 1.99
Foxn1Q61575 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Foxn1Q61575 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.49■■□□□ 1.99
Foxn1Q61575 Gm5522-201ENSMUST00000189483 1242 ntBASIC27.48■■□□□ 1.99
Foxn1Q61575 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Foxn1Q61575 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.48■■□□□ 1.99
Foxn1Q61575 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Foxn1Q61575 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Foxn1Q61575 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Foxn1Q61575 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Foxn1Q61575 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC27.46■■□□□ 1.99
Foxn1Q61575 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Foxn1Q61575 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.45■■□□□ 1.98
Foxn1Q61575 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
Foxn1Q61575 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.44■■□□□ 1.98
Foxn1Q61575 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Foxn1Q61575 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Foxn1Q61575 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Foxn1Q61575 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Foxn1Q61575 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.42■■□□□ 1.98
Foxn1Q61575 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Foxn1Q61575 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Foxn1Q61575 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Foxn1Q61575 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.4■■□□□ 1.98
Foxn1Q61575 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Foxn1Q61575 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Foxn1Q61575 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.39■■□□□ 1.98
Foxn1Q61575 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
Foxn1Q61575 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Foxn1Q61575 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC27.38■■□□□ 1.97
Foxn1Q61575 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Foxn1Q61575 AC093043.1-201ENSMUST00000226700 898 ntBASIC27.38■■□□□ 1.97
Foxn1Q61575 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Foxn1Q61575 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.37■■□□□ 1.97
Foxn1Q61575 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Foxn1Q61575 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Foxn1Q61575 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Foxn1Q61575 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.36■■□□□ 1.97
Foxn1Q61575 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Foxn1Q61575 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC27.36■■□□□ 1.97
Foxn1Q61575 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Foxn1Q61575 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Foxn1Q61575 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
Foxn1Q61575 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms