Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ccne1Q61457 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ccne1Q61457 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ccne1Q61457 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.4■■■□□ 2.62
Ccne1Q61457 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ccne1Q61457 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccne1Q61457 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC31.38■■■□□ 2.61
Ccne1Q61457 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ccne1Q61457 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.35■■■□□ 2.61
Ccne1Q61457 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Ccne1Q61457 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.35■■■□□ 2.61
Ccne1Q61457 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Ccne1Q61457 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccne1Q61457 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccne1Q61457 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31.33■■■□□ 2.61
Ccne1Q61457 Scarna2-201ENSMUST00000157560 414 ntBASIC31.33■■■□□ 2.61
Ccne1Q61457 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Ccne1Q61457 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccne1Q61457 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC31.33■■■□□ 2.61
Ccne1Q61457 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccne1Q61457 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccne1Q61457 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccne1Q61457 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Ccne1Q61457 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.31■■■□□ 2.6
Ccne1Q61457 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccne1Q61457 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.3■■■□□ 2.6
Ccne1Q61457 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccne1Q61457 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccne1Q61457 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31.29■■■□□ 2.6
Ccne1Q61457 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Ccne1Q61457 Gm37136-201ENSMUST00000194368 194 ntBASIC31.27■■■□□ 2.6
Ccne1Q61457 Gm4799-201ENSMUST00000095396 657 ntBASIC31.27■■■□□ 2.6
Ccne1Q61457 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccne1Q61457 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
Ccne1Q61457 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.26■■■□□ 2.59
Ccne1Q61457 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC31.25■■■□□ 2.59
Ccne1Q61457 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Ccne1Q61457 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.25■■■□□ 2.59
Ccne1Q61457 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
Ccne1Q61457 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
Ccne1Q61457 AC154454.1-201ENSMUST00000225253 216 ntBASIC31.23■■■□□ 2.59
Ccne1Q61457 Pkd1-207ENSMUST00000228550 1050 ntBASIC31.23■■■□□ 2.59
Ccne1Q61457 Gm9806-201ENSMUST00000051080 552 ntBASIC31.23■■■□□ 2.59
Ccne1Q61457 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccne1Q61457 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccne1Q61457 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC31.22■■■□□ 2.59
Ccne1Q61457 Mir3960-201ENSMUST00000198213 73 ntBASIC31.21■■■□□ 2.59
Ccne1Q61457 Gm45364-201ENSMUST00000210883 159 ntBASIC31.21■■■□□ 2.59
Ccne1Q61457 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Ccne1Q61457 Gm16437-201ENSMUST00000025669 507 ntBASIC31.19■■■□□ 2.58
Ccne1Q61457 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ccne1Q61457 Gm11687-201ENSMUST00000118911 886 ntBASIC31.18■■■□□ 2.58
Ccne1Q61457 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccne1Q61457 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Ccne1Q61457 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31.16■■■□□ 2.58
Ccne1Q61457 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ccne1Q61457 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Ccne1Q61457 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccne1Q61457 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccne1Q61457 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccne1Q61457 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccne1Q61457 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC31.13■■■□□ 2.57
Ccne1Q61457 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Ccne1Q61457 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Ccne1Q61457 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccne1Q61457 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Ccne1Q61457 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.11■■■□□ 2.57
Ccne1Q61457 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ccne1Q61457 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC31.09■■■□□ 2.57
Ccne1Q61457 Gm12366-201ENSMUST00000121722 873 ntBASIC31.09■■■□□ 2.57
Ccne1Q61457 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC31.09■■■□□ 2.57
Ccne1Q61457 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ccne1Q61457 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC31.09■■■□□ 2.57
Ccne1Q61457 Gm5786-201ENSMUST00000085368 882 ntBASIC31.09■■■□□ 2.57
Ccne1Q61457 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ccne1Q61457 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC31.08■■■□□ 2.57
Ccne1Q61457 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccne1Q61457 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Ccne1Q61457 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ccne1Q61457 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.06■■■□□ 2.56
Ccne1Q61457 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.05■■■□□ 2.56
Ccne1Q61457 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31.05■■■□□ 2.56
Ccne1Q61457 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC31.05■■■□□ 2.56
Ccne1Q61457 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC31.05■■■□□ 2.56
Ccne1Q61457 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccne1Q61457 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccne1Q61457 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccne1Q61457 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccne1Q61457 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ccne1Q61457 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccne1Q61457 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
Ccne1Q61457 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ccne1Q61457 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ccne1Q61457 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ccne1Q61457 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ccne1Q61457 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ccne1Q61457 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
Ccne1Q61457 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
Ccne1Q61457 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31■■■□□ 2.55
Ccne1Q61457 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms