Protein–RNA interactions for Protein: Q52KE7

Ccnl1, Cyclin-L1, mousemouse

Known RBP Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnl1Q52KE7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ccnl1Q52KE7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Ccnl1Q52KE7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30.7■■■□□ 2.51
Ccnl1Q52KE7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ccnl1Q52KE7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ccnl1Q52KE7 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.69■■■□□ 2.5
Ccnl1Q52KE7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ccnl1Q52KE7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Ccnl1Q52KE7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC30.68■■■□□ 2.5
Ccnl1Q52KE7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Ccnl1Q52KE7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ccnl1Q52KE7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ccnl1Q52KE7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC30.66■■■□□ 2.5
Ccnl1Q52KE7 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.66■■■□□ 2.5
Ccnl1Q52KE7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Ccnl1Q52KE7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Ccnl1Q52KE7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ccnl1Q52KE7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30.64■■■□□ 2.5
Ccnl1Q52KE7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ccnl1Q52KE7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ccnl1Q52KE7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccnl1Q52KE7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ccnl1Q52KE7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30.62■■■□□ 2.49
Ccnl1Q52KE7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC30.61■■■□□ 2.49
Ccnl1Q52KE7 Mir3960-201ENSMUST00000198213 73 ntBASIC30.61■■■□□ 2.49
Ccnl1Q52KE7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
Ccnl1Q52KE7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ccnl1Q52KE7 Gm45364-201ENSMUST00000210883 159 ntBASIC30.6■■■□□ 2.49
Ccnl1Q52KE7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
Ccnl1Q52KE7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccnl1Q52KE7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ccnl1Q52KE7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Ccnl1Q52KE7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccnl1Q52KE7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccnl1Q52KE7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30.56■■■□□ 2.48
Ccnl1Q52KE7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ccnl1Q52KE7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ccnl1Q52KE7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccnl1Q52KE7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ccnl1Q52KE7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccnl1Q52KE7 Gm27502-201ENSMUST00000183495 199 ntBASIC30.51■■■□□ 2.47
Ccnl1Q52KE7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccnl1Q52KE7 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.5■■■□□ 2.47
Ccnl1Q52KE7 Gm37136-201ENSMUST00000194368 194 ntBASIC30.5■■■□□ 2.47
Ccnl1Q52KE7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccnl1Q52KE7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccnl1Q52KE7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccnl1Q52KE7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
Ccnl1Q52KE7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Ccnl1Q52KE7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ccnl1Q52KE7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccnl1Q52KE7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccnl1Q52KE7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.46■■■□□ 2.47
Ccnl1Q52KE7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Ccnl1Q52KE7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Ccnl1Q52KE7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Ccnl1Q52KE7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.45■■■□□ 2.47
Ccnl1Q52KE7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Ccnl1Q52KE7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ccnl1Q52KE7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccnl1Q52KE7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ccnl1Q52KE7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
Ccnl1Q52KE7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.42■■■□□ 2.46
Ccnl1Q52KE7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccnl1Q52KE7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccnl1Q52KE7 Gm7332-201ENSMUST00000118351 454 ntBASIC30.42■■■□□ 2.46
Ccnl1Q52KE7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccnl1Q52KE7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC30.41■■■□□ 2.46
Ccnl1Q52KE7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC30.41■■■□□ 2.46
Ccnl1Q52KE7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccnl1Q52KE7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccnl1Q52KE7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccnl1Q52KE7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Ccnl1Q52KE7 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.4■■■□□ 2.46
Ccnl1Q52KE7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Ccnl1Q52KE7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccnl1Q52KE7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30.38■■■□□ 2.45
Ccnl1Q52KE7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30.38■■■□□ 2.45
Ccnl1Q52KE7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Ccnl1Q52KE7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC30.36■■■□□ 2.45
Ccnl1Q52KE7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccnl1Q52KE7 Gm12818-201ENSMUST00000117562 1349 ntBASIC30.34■■■□□ 2.45
Ccnl1Q52KE7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccnl1Q52KE7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ccnl1Q52KE7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ccnl1Q52KE7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Ccnl1Q52KE7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ccnl1Q52KE7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ccnl1Q52KE7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
Ccnl1Q52KE7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ccnl1Q52KE7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ccnl1Q52KE7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC30.28■■■□□ 2.44
Ccnl1Q52KE7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccnl1Q52KE7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccnl1Q52KE7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Ccnl1Q52KE7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Ccnl1Q52KE7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.28■■■□□ 2.44
Ccnl1Q52KE7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccnl1Q52KE7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Ccnl1Q52KE7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms