Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm45364-201ENSMUST00000210883 159 ntBASIC24.42■■□□□ 1.5
Fam196aQ3USH1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Fam196aQ3USH1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Fam196aQ3USH1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Fam196aQ3USH1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Fam196aQ3USH1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Fam196aQ3USH1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Fam196aQ3USH1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Fam196aQ3USH1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Fam196aQ3USH1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Fam196aQ3USH1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Fam196aQ3USH1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Fam196aQ3USH1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Fam196aQ3USH1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
Fam196aQ3USH1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Fam196aQ3USH1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Fam196aQ3USH1 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.35■■□□□ 1.49
Fam196aQ3USH1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.35■■□□□ 1.49
Fam196aQ3USH1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Fam196aQ3USH1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Fam196aQ3USH1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Fam196aQ3USH1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.33■■□□□ 1.49
Fam196aQ3USH1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.33■■□□□ 1.49
Fam196aQ3USH1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
Fam196aQ3USH1 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.32■■□□□ 1.48
Fam196aQ3USH1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.31■■□□□ 1.48
Fam196aQ3USH1 Gm15546-201ENSMUST00000122095 826 ntBASIC24.31■■□□□ 1.48
Fam196aQ3USH1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Fam196aQ3USH1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Fam196aQ3USH1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Fam196aQ3USH1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Fam196aQ3USH1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Fam196aQ3USH1 Gm5921-201ENSMUST00000075898 882 ntBASIC24.3■■□□□ 1.48
Fam196aQ3USH1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Fam196aQ3USH1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Fam196aQ3USH1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Fam196aQ3USH1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Fam196aQ3USH1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Fam196aQ3USH1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.27■■□□□ 1.48
Fam196aQ3USH1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Fam196aQ3USH1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Fam196aQ3USH1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Fam196aQ3USH1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Fam196aQ3USH1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.25■■□□□ 1.47
Fam196aQ3USH1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Fam196aQ3USH1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Fam196aQ3USH1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Fam196aQ3USH1 Gm10420-201ENSMUST00000121713 882 ntBASIC24.23■■□□□ 1.47
Fam196aQ3USH1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Fam196aQ3USH1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Fam196aQ3USH1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Fam196aQ3USH1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Fam196aQ3USH1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Fam196aQ3USH1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.22■■□□□ 1.47
Fam196aQ3USH1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Fam196aQ3USH1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Fam196aQ3USH1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Fam196aQ3USH1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Fam196aQ3USH1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Fam196aQ3USH1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.2■■□□□ 1.46
Fam196aQ3USH1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Fam196aQ3USH1 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.19■■□□□ 1.46
Fam196aQ3USH1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Fam196aQ3USH1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Fam196aQ3USH1 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.19■■□□□ 1.46
Fam196aQ3USH1 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.18■■□□□ 1.46
Fam196aQ3USH1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Fam196aQ3USH1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Fam196aQ3USH1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Fam196aQ3USH1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Fam196aQ3USH1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Fam196aQ3USH1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.17■■□□□ 1.46
Fam196aQ3USH1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Fam196aQ3USH1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Fam196aQ3USH1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Fam196aQ3USH1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Fam196aQ3USH1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.14■■□□□ 1.45
Fam196aQ3USH1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.14■■□□□ 1.45
Fam196aQ3USH1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Fam196aQ3USH1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Fam196aQ3USH1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Fam196aQ3USH1 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.13■■□□□ 1.45
Fam196aQ3USH1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.13■■□□□ 1.45
Fam196aQ3USH1 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.13■■□□□ 1.45
Fam196aQ3USH1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Fam196aQ3USH1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Fam196aQ3USH1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.12■■□□□ 1.45
Fam196aQ3USH1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Fam196aQ3USH1 Gm37136-201ENSMUST00000194368 194 ntBASIC24.11■■□□□ 1.45
Fam196aQ3USH1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.11■■□□□ 1.45
Fam196aQ3USH1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.11■■□□□ 1.45
Fam196aQ3USH1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Fam196aQ3USH1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Fam196aQ3USH1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Fam196aQ3USH1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Fam196aQ3USH1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Fam196aQ3USH1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Fam196aQ3USH1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.1■■□□□ 1.45
Fam196aQ3USH1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Fam196aQ3USH1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms