Protein–RNA interactions for Protein: Q3ULP7

Ctsll3, Cathepsin L-like 3, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctsll3Q3ULP7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ctsll3Q3ULP7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.01■■□□□ 1.11
Ctsll3Q3ULP7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ctsll3Q3ULP7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.01■■□□□ 1.11
Ctsll3Q3ULP7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ctsll3Q3ULP7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ctsll3Q3ULP7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ctsll3Q3ULP7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ctsll3Q3ULP7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22■■□□□ 1.11
Ctsll3Q3ULP7 Gm12366-201ENSMUST00000121722 873 ntBASIC22■■□□□ 1.11
Ctsll3Q3ULP7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22■■□□□ 1.11
Ctsll3Q3ULP7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22■■□□□ 1.11
Ctsll3Q3ULP7 Gm5786-201ENSMUST00000085368 882 ntBASIC22■■□□□ 1.11
Ctsll3Q3ULP7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ctsll3Q3ULP7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Ctsll3Q3ULP7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ctsll3Q3ULP7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ctsll3Q3ULP7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ctsll3Q3ULP7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ctsll3Q3ULP7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ctsll3Q3ULP7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ctsll3Q3ULP7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.97■■□□□ 1.11
Ctsll3Q3ULP7 Mir3960-201ENSMUST00000198213 73 ntBASIC21.97■■□□□ 1.11
Ctsll3Q3ULP7 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.97■■□□□ 1.11
Ctsll3Q3ULP7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ctsll3Q3ULP7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ctsll3Q3ULP7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ctsll3Q3ULP7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ctsll3Q3ULP7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ctsll3Q3ULP7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ctsll3Q3ULP7 Gm45364-201ENSMUST00000210883 159 ntBASIC21.92■■□□□ 1.1
Ctsll3Q3ULP7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ctsll3Q3ULP7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.91■■□□□ 1.1
Ctsll3Q3ULP7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.91■■□□□ 1.1
Ctsll3Q3ULP7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ctsll3Q3ULP7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Ctsll3Q3ULP7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ctsll3Q3ULP7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ctsll3Q3ULP7 Gm27502-201ENSMUST00000183495 199 ntBASIC21.9■■□□□ 1.1
Ctsll3Q3ULP7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ctsll3Q3ULP7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ctsll3Q3ULP7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ctsll3Q3ULP7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ctsll3Q3ULP7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ctsll3Q3ULP7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ctsll3Q3ULP7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ctsll3Q3ULP7 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.87■■□□□ 1.09
Ctsll3Q3ULP7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ctsll3Q3ULP7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ctsll3Q3ULP7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ctsll3Q3ULP7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ctsll3Q3ULP7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ctsll3Q3ULP7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ctsll3Q3ULP7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ctsll3Q3ULP7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ctsll3Q3ULP7 Gm37136-201ENSMUST00000194368 194 ntBASIC21.85■■□□□ 1.09
Ctsll3Q3ULP7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ctsll3Q3ULP7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.84■■□□□ 1.09
Ctsll3Q3ULP7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ctsll3Q3ULP7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.84■■□□□ 1.09
Ctsll3Q3ULP7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ctsll3Q3ULP7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ctsll3Q3ULP7 Gm7332-201ENSMUST00000118351 454 ntBASIC21.83■■□□□ 1.09
Ctsll3Q3ULP7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ctsll3Q3ULP7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.83■■□□□ 1.09
Ctsll3Q3ULP7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.83■■□□□ 1.08
Ctsll3Q3ULP7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ctsll3Q3ULP7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Ctsll3Q3ULP7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Ctsll3Q3ULP7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.82■■□□□ 1.08
Ctsll3Q3ULP7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctsll3Q3ULP7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctsll3Q3ULP7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ctsll3Q3ULP7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctsll3Q3ULP7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.81■■□□□ 1.08
Ctsll3Q3ULP7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.8■■□□□ 1.08
Ctsll3Q3ULP7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctsll3Q3ULP7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctsll3Q3ULP7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ctsll3Q3ULP7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ctsll3Q3ULP7 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.78■■□□□ 1.08
Ctsll3Q3ULP7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ctsll3Q3ULP7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctsll3Q3ULP7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ctsll3Q3ULP7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctsll3Q3ULP7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.76■■□□□ 1.07
Ctsll3Q3ULP7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ctsll3Q3ULP7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctsll3Q3ULP7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.75■■□□□ 1.07
Ctsll3Q3ULP7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.75■■□□□ 1.07
Ctsll3Q3ULP7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctsll3Q3ULP7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ctsll3Q3ULP7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ctsll3Q3ULP7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ctsll3Q3ULP7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ctsll3Q3ULP7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ctsll3Q3ULP7 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.73■■□□□ 1.07
Ctsll3Q3ULP7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.72■■□□□ 1.07
Ctsll3Q3ULP7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.72■■□□□ 1.07
Ctsll3Q3ULP7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms