Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.51■■■□□ 2.15
Spg7Q3ULF4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.51■■■□□ 2.15
Spg7Q3ULF4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Spg7Q3ULF4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Spg7Q3ULF4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Spg7Q3ULF4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Spg7Q3ULF4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Spg7Q3ULF4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Spg7Q3ULF4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Spg7Q3ULF4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Spg7Q3ULF4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Spg7Q3ULF4 Gm37136-201ENSMUST00000194368 194 ntBASIC28.44■■■□□ 2.14
Spg7Q3ULF4 Gm4799-201ENSMUST00000095396 657 ntBASIC28.44■■■□□ 2.14
Spg7Q3ULF4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Spg7Q3ULF4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Spg7Q3ULF4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Spg7Q3ULF4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Spg7Q3ULF4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Spg7Q3ULF4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Spg7Q3ULF4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Spg7Q3ULF4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Spg7Q3ULF4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.41■■■□□ 2.14
Spg7Q3ULF4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
Spg7Q3ULF4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.4■■■□□ 2.14
Spg7Q3ULF4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Spg7Q3ULF4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.4■■■□□ 2.14
Spg7Q3ULF4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Spg7Q3ULF4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Spg7Q3ULF4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.38■■■□□ 2.13
Spg7Q3ULF4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Spg7Q3ULF4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Spg7Q3ULF4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.37■■■□□ 2.13
Spg7Q3ULF4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Spg7Q3ULF4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Spg7Q3ULF4 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.36■■■□□ 2.13
Spg7Q3ULF4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Spg7Q3ULF4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Spg7Q3ULF4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Spg7Q3ULF4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Spg7Q3ULF4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Spg7Q3ULF4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Spg7Q3ULF4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.33■■■□□ 2.13
Spg7Q3ULF4 Mir3960-201ENSMUST00000198213 73 ntBASIC28.33■■■□□ 2.13
Spg7Q3ULF4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Spg7Q3ULF4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Spg7Q3ULF4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Spg7Q3ULF4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Spg7Q3ULF4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Spg7Q3ULF4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Spg7Q3ULF4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Spg7Q3ULF4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Spg7Q3ULF4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Spg7Q3ULF4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.3■■■□□ 2.12
Spg7Q3ULF4 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.3■■■□□ 2.12
Spg7Q3ULF4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
Spg7Q3ULF4 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.29■■■□□ 2.12
Spg7Q3ULF4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Spg7Q3ULF4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Spg7Q3ULF4 Cap2-205ENSMUST00000225824 1634 ntBASIC28.26■■■□□ 2.11
Spg7Q3ULF4 Scarna2-201ENSMUST00000157560 414 ntBASIC28.26■■■□□ 2.11
Spg7Q3ULF4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Spg7Q3ULF4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Spg7Q3ULF4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Spg7Q3ULF4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Spg7Q3ULF4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Spg7Q3ULF4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Spg7Q3ULF4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Spg7Q3ULF4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Spg7Q3ULF4 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.24■■■□□ 2.11
Spg7Q3ULF4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Spg7Q3ULF4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Spg7Q3ULF4 Gm9806-201ENSMUST00000051080 552 ntBASIC28.23■■■□□ 2.11
Spg7Q3ULF4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.23■■■□□ 2.11
Spg7Q3ULF4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Spg7Q3ULF4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Spg7Q3ULF4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
Spg7Q3ULF4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Spg7Q3ULF4 Gm11687-201ENSMUST00000118911 886 ntBASIC28.21■■■□□ 2.11
Spg7Q3ULF4 Gm45364-201ENSMUST00000210883 159 ntBASIC28.21■■■□□ 2.11
Spg7Q3ULF4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Spg7Q3ULF4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Spg7Q3ULF4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.2■■■□□ 2.1
Spg7Q3ULF4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.2■■■□□ 2.1
Spg7Q3ULF4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Spg7Q3ULF4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Spg7Q3ULF4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Spg7Q3ULF4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Spg7Q3ULF4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.17■■■□□ 2.1
Spg7Q3ULF4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Spg7Q3ULF4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Spg7Q3ULF4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Spg7Q3ULF4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Spg7Q3ULF4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Spg7Q3ULF4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.15■■■□□ 2.1
Spg7Q3ULF4 Gm16437-201ENSMUST00000025669 507 ntBASIC28.15■■■□□ 2.1
Spg7Q3ULF4 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.15■■■□□ 2.1
Spg7Q3ULF4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Spg7Q3ULF4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.13■■■□□ 2.09
Spg7Q3ULF4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Spg7Q3ULF4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms