Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Carmil3Q3UFQ8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Carmil3Q3UFQ8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Carmil3Q3UFQ8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
Carmil3Q3UFQ8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.97■■■□□ 2.23
Carmil3Q3UFQ8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
Carmil3Q3UFQ8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Carmil3Q3UFQ8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Carmil3Q3UFQ8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Carmil3Q3UFQ8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
Carmil3Q3UFQ8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Carmil3Q3UFQ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.91■■■□□ 2.22
Carmil3Q3UFQ8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Carmil3Q3UFQ8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Carmil3Q3UFQ8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Carmil3Q3UFQ8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Carmil3Q3UFQ8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Carmil3Q3UFQ8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Carmil3Q3UFQ8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.88■■■□□ 2.21
Carmil3Q3UFQ8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.88■■■□□ 2.21
Carmil3Q3UFQ8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
Carmil3Q3UFQ8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Carmil3Q3UFQ8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Carmil3Q3UFQ8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.86■■■□□ 2.21
Carmil3Q3UFQ8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Carmil3Q3UFQ8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Carmil3Q3UFQ8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Carmil3Q3UFQ8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.85■■■□□ 2.21
Carmil3Q3UFQ8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Carmil3Q3UFQ8 Amer2-203ENSMUST00000225247 2662 ntBASIC28.84■■■□□ 2.21
Carmil3Q3UFQ8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
Carmil3Q3UFQ8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Carmil3Q3UFQ8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.81■■■□□ 2.2
Carmil3Q3UFQ8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Carmil3Q3UFQ8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.8■■■□□ 2.2
Carmil3Q3UFQ8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Carmil3Q3UFQ8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Carmil3Q3UFQ8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Carmil3Q3UFQ8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Carmil3Q3UFQ8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Carmil3Q3UFQ8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Carmil3Q3UFQ8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.77■■■□□ 2.2
Carmil3Q3UFQ8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Carmil3Q3UFQ8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Carmil3Q3UFQ8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Carmil3Q3UFQ8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.76■■■□□ 2.2
Carmil3Q3UFQ8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
Carmil3Q3UFQ8 Scarna2-201ENSMUST00000157560 414 ntBASIC28.76■■■□□ 2.2
Carmil3Q3UFQ8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.2
Carmil3Q3UFQ8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.76■■■□□ 2.2
Carmil3Q3UFQ8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Carmil3Q3UFQ8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Carmil3Q3UFQ8 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.75■■■□□ 2.19
Carmil3Q3UFQ8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.75■■■□□ 2.19
Carmil3Q3UFQ8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Carmil3Q3UFQ8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Carmil3Q3UFQ8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Carmil3Q3UFQ8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Carmil3Q3UFQ8 Gm9806-201ENSMUST00000051080 552 ntBASIC28.73■■■□□ 2.19
Carmil3Q3UFQ8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Carmil3Q3UFQ8 Gm11687-201ENSMUST00000118911 886 ntBASIC28.72■■■□□ 2.19
Carmil3Q3UFQ8 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.72■■■□□ 2.19
Carmil3Q3UFQ8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
Carmil3Q3UFQ8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Carmil3Q3UFQ8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Carmil3Q3UFQ8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.7■■■□□ 2.19
Carmil3Q3UFQ8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.7■■■□□ 2.18
Carmil3Q3UFQ8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.69■■■□□ 2.18
Carmil3Q3UFQ8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Carmil3Q3UFQ8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.68■■■□□ 2.18
Carmil3Q3UFQ8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Carmil3Q3UFQ8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.67■■■□□ 2.18
Carmil3Q3UFQ8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Carmil3Q3UFQ8 Mir3960-201ENSMUST00000198213 73 ntBASIC28.66■■■□□ 2.18
Carmil3Q3UFQ8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Carmil3Q3UFQ8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Carmil3Q3UFQ8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Carmil3Q3UFQ8 Gm4799-201ENSMUST00000095396 657 ntBASIC28.65■■■□□ 2.18
Carmil3Q3UFQ8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Carmil3Q3UFQ8 Gm37136-201ENSMUST00000194368 194 ntBASIC28.64■■■□□ 2.18
Carmil3Q3UFQ8 Gm45364-201ENSMUST00000210883 159 ntBASIC28.64■■■□□ 2.18
Carmil3Q3UFQ8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Carmil3Q3UFQ8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Carmil3Q3UFQ8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Carmil3Q3UFQ8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.63■■■□□ 2.17
Carmil3Q3UFQ8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Carmil3Q3UFQ8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Carmil3Q3UFQ8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Carmil3Q3UFQ8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.6■■■□□ 2.17
Carmil3Q3UFQ8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Carmil3Q3UFQ8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.59■■■□□ 2.17
Carmil3Q3UFQ8 Gm12366-201ENSMUST00000121722 873 ntBASIC28.59■■■□□ 2.17
Carmil3Q3UFQ8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.59■■■□□ 2.17
Carmil3Q3UFQ8 Gm16437-201ENSMUST00000025669 507 ntBASIC28.59■■■□□ 2.17
Carmil3Q3UFQ8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.59■■■□□ 2.17
Carmil3Q3UFQ8 Gm5786-201ENSMUST00000085368 882 ntBASIC28.59■■■□□ 2.17
Carmil3Q3UFQ8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
Carmil3Q3UFQ8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.58■■■□□ 2.17
Carmil3Q3UFQ8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.58■■■□□ 2.17
Carmil3Q3UFQ8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms