Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.49■■□□□ 1.51
Ybx1P62960 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ybx1P62960 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ybx1P62960 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.49■■□□□ 1.51
Ybx1P62960 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Ybx1P62960 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ybx1P62960 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ybx1P62960 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ybx1P62960 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ybx1P62960 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ybx1P62960 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ybx1P62960 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ybx1P62960 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ybx1P62960 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.46■■□□□ 1.51
Ybx1P62960 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ybx1P62960 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ybx1P62960 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ybx1P62960 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ybx1P62960 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ybx1P62960 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ybx1P62960 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ybx1P62960 Scarna2-201ENSMUST00000157560 414 ntBASIC24.43■■□□□ 1.5
Ybx1P62960 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.43■■□□□ 1.5
Ybx1P62960 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ybx1P62960 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ybx1P62960 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.41■■□□□ 1.5
Ybx1P62960 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ybx1P62960 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ybx1P62960 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ybx1P62960 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ybx1P62960 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ybx1P62960 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ybx1P62960 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ybx1P62960 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ybx1P62960 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.38■■□□□ 1.49
Ybx1P62960 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.38■■□□□ 1.49
Ybx1P62960 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ybx1P62960 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ybx1P62960 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.37■■□□□ 1.49
Ybx1P62960 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ybx1P62960 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Ybx1P62960 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ybx1P62960 Amer2-203ENSMUST00000225247 2662 ntBASIC24.36■■□□□ 1.49
Ybx1P62960 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ybx1P62960 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ybx1P62960 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ybx1P62960 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.34■■□□□ 1.49
Ybx1P62960 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.34■■□□□ 1.49
Ybx1P62960 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ybx1P62960 Gm9806-201ENSMUST00000051080 552 ntBASIC24.33■■□□□ 1.49
Ybx1P62960 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Ybx1P62960 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ybx1P62960 Gm16437-201ENSMUST00000025669 507 ntBASIC24.32■■□□□ 1.48
Ybx1P62960 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ybx1P62960 Gm4799-201ENSMUST00000095396 657 ntBASIC24.32■■□□□ 1.48
Ybx1P62960 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.32■■□□□ 1.48
Ybx1P62960 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ybx1P62960 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ybx1P62960 Gm11687-201ENSMUST00000118911 886 ntBASIC24.31■■□□□ 1.48
Ybx1P62960 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.31■■□□□ 1.48
Ybx1P62960 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.31■■□□□ 1.48
Ybx1P62960 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ybx1P62960 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ybx1P62960 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ybx1P62960 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ybx1P62960 Gm45364-201ENSMUST00000210883 159 ntBASIC24.29■■□□□ 1.48
Ybx1P62960 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ybx1P62960 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ybx1P62960 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ybx1P62960 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.28■■□□□ 1.48
Ybx1P62960 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ybx1P62960 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.27■■□□□ 1.48
Ybx1P62960 Gm12366-201ENSMUST00000121722 873 ntBASIC24.27■■□□□ 1.48
Ybx1P62960 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.27■■□□□ 1.48
Ybx1P62960 Mir3960-201ENSMUST00000198213 73 ntBASIC24.27■■□□□ 1.48
Ybx1P62960 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.27■■□□□ 1.48
Ybx1P62960 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.27■■□□□ 1.48
Ybx1P62960 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ybx1P62960 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.27■■□□□ 1.48
Ybx1P62960 Gm5786-201ENSMUST00000085368 882 ntBASIC24.27■■□□□ 1.48
Ybx1P62960 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ybx1P62960 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ybx1P62960 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ybx1P62960 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ybx1P62960 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.26■■□□□ 1.47
Ybx1P62960 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ybx1P62960 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.25■■□□□ 1.47
Ybx1P62960 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.25■■□□□ 1.47
Ybx1P62960 Gm37136-201ENSMUST00000194368 194 ntBASIC24.25■■□□□ 1.47
Ybx1P62960 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ybx1P62960 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ybx1P62960 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Ybx1P62960 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.24■■□□□ 1.47
Ybx1P62960 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ybx1P62960 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ybx1P62960 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ybx1P62960 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ybx1P62960 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ybx1P62960 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ybx1P62960 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.22■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 277 ms