Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gabra1P62812 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Gabra1P62812 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.76■□□□□ 0.75
Gabra1P62812 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Gabra1P62812 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gabra1P62812 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gabra1P62812 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gabra1P62812 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Gabra1P62812 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gabra1P62812 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gabra1P62812 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.74■□□□□ 0.75
Gabra1P62812 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gabra1P62812 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.73■□□□□ 0.75
Gabra1P62812 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gabra1P62812 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gabra1P62812 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gabra1P62812 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gabra1P62812 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gabra1P62812 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gabra1P62812 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gabra1P62812 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gabra1P62812 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gabra1P62812 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gabra1P62812 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gabra1P62812 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gabra1P62812 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gabra1P62812 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gabra1P62812 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gabra1P62812 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Gabra1P62812 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gabra1P62812 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gabra1P62812 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gabra1P62812 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gabra1P62812 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gabra1P62812 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gabra1P62812 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gabra1P62812 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.68■□□□□ 0.74
Gabra1P62812 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gabra1P62812 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gabra1P62812 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gabra1P62812 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gabra1P62812 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gabra1P62812 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gabra1P62812 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gabra1P62812 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gabra1P62812 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gabra1P62812 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gabra1P62812 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.66■□□□□ 0.74
Gabra1P62812 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gabra1P62812 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gabra1P62812 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Gabra1P62812 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gabra1P62812 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.64■□□□□ 0.73
Gabra1P62812 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gabra1P62812 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabra1P62812 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabra1P62812 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Gabra1P62812 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabra1P62812 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.64■□□□□ 0.73
Gabra1P62812 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabra1P62812 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabra1P62812 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Gabra1P62812 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Gabra1P62812 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabra1P62812 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabra1P62812 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabra1P62812 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Gabra1P62812 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gabra1P62812 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gabra1P62812 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gabra1P62812 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Gabra1P62812 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gabra1P62812 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gabra1P62812 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabra1P62812 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabra1P62812 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabra1P62812 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.6■□□□□ 0.73
Gabra1P62812 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabra1P62812 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabra1P62812 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabra1P62812 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Gabra1P62812 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gabra1P62812 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gabra1P62812 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gabra1P62812 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gabra1P62812 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.56■□□□□ 0.72
Gabra1P62812 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Gabra1P62812 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gabra1P62812 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gabra1P62812 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gabra1P62812 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gabra1P62812 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Gabra1P62812 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Gabra1P62812 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gabra1P62812 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gabra1P62812 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gabra1P62812 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gabra1P62812 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gabra1P62812 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gabra1P62812 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms