Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc1a3P56564 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc1a3P56564 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.08■□□□□ 0.97
Slc1a3P56564 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.08■□□□□ 0.97
Slc1a3P56564 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc1a3P56564 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Slc1a3P56564 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc1a3P56564 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc1a3P56564 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a3P56564 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a3P56564 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a3P56564 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a3P56564 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a3P56564 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a3P56564 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc1a3P56564 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Slc1a3P56564 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc1a3P56564 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Slc1a3P56564 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.05■□□□□ 0.96
Slc1a3P56564 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Slc1a3P56564 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc1a3P56564 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc1a3P56564 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Slc1a3P56564 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc1a3P56564 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.04■□□□□ 0.96
Slc1a3P56564 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc1a3P56564 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.03■□□□□ 0.96
Slc1a3P56564 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc1a3P56564 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc1a3P56564 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc1a3P56564 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Slc1a3P56564 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slc1a3P56564 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc1a3P56564 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21■□□□□ 0.95
Slc1a3P56564 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc1a3P56564 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Slc1a3P56564 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc1a3P56564 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc1a3P56564 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a3P56564 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a3P56564 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a3P56564 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a3P56564 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc1a3P56564 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Slc1a3P56564 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc1a3P56564 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc1a3P56564 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc1a3P56564 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc1a3P56564 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc1a3P56564 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc1a3P56564 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc1a3P56564 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc1a3P56564 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc1a3P56564 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a3P56564 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a3P56564 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a3P56564 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc1a3P56564 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a3P56564 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a3P56564 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Slc1a3P56564 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a3P56564 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a3P56564 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a3P56564 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a3P56564 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Slc1a3P56564 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a3P56564 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Slc1a3P56564 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a3P56564 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc1a3P56564 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a3P56564 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Slc1a3P56564 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a3P56564 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a3P56564 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Slc1a3P56564 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a3P56564 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a3P56564 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.86■□□□□ 0.93
Slc1a3P56564 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Slc1a3P56564 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a3P56564 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a3P56564 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a3P56564 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.85■□□□□ 0.93
Slc1a3P56564 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a3P56564 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a3P56564 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a3P56564 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.84■□□□□ 0.93
Slc1a3P56564 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a3P56564 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a3P56564 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc1a3P56564 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Slc1a3P56564 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a3P56564 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a3P56564 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.82■□□□□ 0.92
Slc1a3P56564 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.82■□□□□ 0.92
Slc1a3P56564 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.82■□□□□ 0.92
Slc1a3P56564 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a3P56564 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a3P56564 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Slc1a3P56564 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a3P56564 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms