Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.4■■□□□ 1.34
Pdx1P52946 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pdx1P52946 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pdx1P52946 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.38■■□□□ 1.33
Pdx1P52946 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.38■■□□□ 1.33
Pdx1P52946 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pdx1P52946 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pdx1P52946 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pdx1P52946 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pdx1P52946 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pdx1P52946 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pdx1P52946 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pdx1P52946 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pdx1P52946 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pdx1P52946 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.35■■□□□ 1.33
Pdx1P52946 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Pdx1P52946 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pdx1P52946 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pdx1P52946 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.34■■□□□ 1.33
Pdx1P52946 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pdx1P52946 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pdx1P52946 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pdx1P52946 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Pdx1P52946 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pdx1P52946 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pdx1P52946 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pdx1P52946 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pdx1P52946 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pdx1P52946 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Pdx1P52946 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pdx1P52946 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pdx1P52946 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.29■■□□□ 1.32
Pdx1P52946 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pdx1P52946 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pdx1P52946 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pdx1P52946 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pdx1P52946 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pdx1P52946 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Pdx1P52946 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pdx1P52946 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pdx1P52946 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Pdx1P52946 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pdx1P52946 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pdx1P52946 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pdx1P52946 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pdx1P52946 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pdx1P52946 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pdx1P52946 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Pdx1P52946 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pdx1P52946 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pdx1P52946 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pdx1P52946 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pdx1P52946 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Pdx1P52946 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pdx1P52946 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pdx1P52946 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdx1P52946 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdx1P52946 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Pdx1P52946 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Pdx1P52946 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Pdx1P52946 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Pdx1P52946 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Pdx1P52946 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.19■■□□□ 1.3
Pdx1P52946 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.19■■□□□ 1.3
Pdx1P52946 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.19■■□□□ 1.3
Pdx1P52946 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Pdx1P52946 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Pdx1P52946 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Pdx1P52946 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
Pdx1P52946 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Pdx1P52946 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.17■■□□□ 1.3
Pdx1P52946 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pdx1P52946 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pdx1P52946 Particl-201ENSMUST00000205370 1560 ntBASIC23.16■■□□□ 1.3
Pdx1P52946 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pdx1P52946 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Pdx1P52946 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pdx1P52946 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pdx1P52946 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.15■■□□□ 1.3
Pdx1P52946 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pdx1P52946 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pdx1P52946 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.13■■□□□ 1.29
Pdx1P52946 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pdx1P52946 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
Pdx1P52946 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.12■■□□□ 1.29
Pdx1P52946 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pdx1P52946 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.11■■□□□ 1.29
Pdx1P52946 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pdx1P52946 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.1■■□□□ 1.29
Pdx1P52946 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.1■■□□□ 1.29
Pdx1P52946 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pdx1P52946 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pdx1P52946 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.09■■□□□ 1.29
Pdx1P52946 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pdx1P52946 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pdx1P52946 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pdx1P52946 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Pdx1P52946 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pdx1P52946 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.06■■□□□ 1.28
Pdx1P52946 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms