Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hnf4aP49698 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hnf4aP49698 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hnf4aP49698 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.72■■□□□ 1.23
Hnf4aP49698 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Hnf4aP49698 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.71■■□□□ 1.23
Hnf4aP49698 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Hnf4aP49698 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Hnf4aP49698 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.7■■□□□ 1.22
Hnf4aP49698 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Hnf4aP49698 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Hnf4aP49698 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Hnf4aP49698 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Hnf4aP49698 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Hnf4aP49698 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Hnf4aP49698 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Hnf4aP49698 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Hnf4aP49698 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Hnf4aP49698 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Hnf4aP49698 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
Hnf4aP49698 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Hnf4aP49698 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.66■■□□□ 1.22
Hnf4aP49698 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hnf4aP49698 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hnf4aP49698 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hnf4aP49698 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hnf4aP49698 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hnf4aP49698 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hnf4aP49698 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
Hnf4aP49698 Nkain2-201ENSMUST00000092602 558 ntBASIC22.63■■□□□ 1.21
Hnf4aP49698 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.63■■□□□ 1.21
Hnf4aP49698 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Hnf4aP49698 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Hnf4aP49698 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Hnf4aP49698 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Hnf4aP49698 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Hnf4aP49698 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Hnf4aP49698 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hnf4aP49698 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Hnf4aP49698 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.59■■□□□ 1.21
Hnf4aP49698 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Hnf4aP49698 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hnf4aP49698 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hnf4aP49698 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Hnf4aP49698 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.58■■□□□ 1.21
Hnf4aP49698 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.58■■□□□ 1.21
Hnf4aP49698 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.58■■□□□ 1.21
Hnf4aP49698 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Hnf4aP49698 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.57■■□□□ 1.2
Hnf4aP49698 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hnf4aP49698 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.56■■□□□ 1.2
Hnf4aP49698 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hnf4aP49698 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hnf4aP49698 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.55■■□□□ 1.2
Hnf4aP49698 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Hnf4aP49698 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.55■■□□□ 1.2
Hnf4aP49698 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hnf4aP49698 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Hnf4aP49698 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Hnf4aP49698 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.54■■□□□ 1.2
Hnf4aP49698 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Hnf4aP49698 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Hnf4aP49698 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
Hnf4aP49698 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Hnf4aP49698 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.53■■□□□ 1.2
Hnf4aP49698 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.53■■□□□ 1.2
Hnf4aP49698 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hnf4aP49698 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hnf4aP49698 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Hnf4aP49698 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Hnf4aP49698 Particl-201ENSMUST00000205370 1560 ntBASIC22.51■■□□□ 1.19
Hnf4aP49698 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.51■■□□□ 1.19
Hnf4aP49698 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Hnf4aP49698 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hnf4aP49698 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Hnf4aP49698 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hnf4aP49698 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Hnf4aP49698 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hnf4aP49698 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hnf4aP49698 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.49■■□□□ 1.19
Hnf4aP49698 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.49■■□□□ 1.19
Hnf4aP49698 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hnf4aP49698 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.48■■□□□ 1.19
Hnf4aP49698 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.47■■□□□ 1.19
Hnf4aP49698 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hnf4aP49698 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hnf4aP49698 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hnf4aP49698 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
Hnf4aP49698 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.46■■□□□ 1.19
Hnf4aP49698 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hnf4aP49698 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hnf4aP49698 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hnf4aP49698 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hnf4aP49698 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Hnf4aP49698 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hnf4aP49698 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Hnf4aP49698 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hnf4aP49698 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hnf4aP49698 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hnf4aP49698 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms