Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd27P41272 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cd27P41272 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.07■□□□□ 0.64
Cd27P41272 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cd27P41272 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.06■□□□□ 0.64
Cd27P41272 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cd27P41272 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cd27P41272 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.04■□□□□ 0.64
Cd27P41272 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.04■□□□□ 0.64
Cd27P41272 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd27P41272 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cd27P41272 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd27P41272 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cd27P41272 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cd27P41272 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd27P41272 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cd27P41272 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.03■□□□□ 0.64
Cd27P41272 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cd27P41272 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd27P41272 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.03■□□□□ 0.64
Cd27P41272 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd27P41272 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cd27P41272 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.02■□□□□ 0.64
Cd27P41272 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cd27P41272 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cd27P41272 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cd27P41272 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd27P41272 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd27P41272 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cd27P41272 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Cd27P41272 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cd27P41272 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd27P41272 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cd27P41272 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd27P41272 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd27P41272 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cd27P41272 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd27P41272 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd27P41272 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cd27P41272 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cd27P41272 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd27P41272 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd27P41272 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd27P41272 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd27P41272 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.98■□□□□ 0.63
Cd27P41272 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd27P41272 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cd27P41272 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd27P41272 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd27P41272 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd27P41272 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cd27P41272 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd27P41272 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cd27P41272 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd27P41272 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd27P41272 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd27P41272 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cd27P41272 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Cd27P41272 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd27P41272 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cd27P41272 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.91■□□□□ 0.62
Cd27P41272 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd27P41272 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cd27P41272 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd27P41272 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cd27P41272 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cd27P41272 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd27P41272 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.9■□□□□ 0.62
Cd27P41272 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cd27P41272 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Cd27P41272 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cd27P41272 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.88■□□□□ 0.61
Cd27P41272 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.88■□□□□ 0.61
Cd27P41272 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cd27P41272 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd27P41272 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.88■□□□□ 0.61
Cd27P41272 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cd27P41272 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cd27P41272 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.87■□□□□ 0.61
Cd27P41272 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd27P41272 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd27P41272 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cd27P41272 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.85■□□□□ 0.61
Cd27P41272 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd27P41272 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd27P41272 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd27P41272 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd27P41272 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Cd27P41272 Particl-201ENSMUST00000205370 1560 ntBASIC18.84■□□□□ 0.61
Cd27P41272 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.83■□□□□ 0.61
Cd27P41272 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
Cd27P41272 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cd27P41272 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd27P41272 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cd27P41272 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.82■□□□□ 0.6
Cd27P41272 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.82■□□□□ 0.6
Cd27P41272 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.82■□□□□ 0.6
Cd27P41272 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cd27P41272 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd27P41272 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms