Protein–RNA interactions for Protein: P16546

Sptan1, Spectrin alpha chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1P16546 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.76■□□□□ 0.91
Sptan1P16546 Gm45364-201ENSMUST00000210883 159 ntBASIC20.76■□□□□ 0.91
Sptan1P16546 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sptan1P16546 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.75■□□□□ 0.91
Sptan1P16546 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sptan1P16546 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sptan1P16546 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sptan1P16546 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sptan1P16546 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sptan1P16546 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sptan1P16546 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sptan1P16546 Gm10420-201ENSMUST00000121713 882 ntBASIC20.71■□□□□ 0.91
Sptan1P16546 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sptan1P16546 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sptan1P16546 Gm27502-201ENSMUST00000183495 199 ntBASIC20.7■□□□□ 0.9
Sptan1P16546 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.69■□□□□ 0.9
Sptan1P16546 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.69■□□□□ 0.9
Sptan1P16546 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sptan1P16546 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.68■□□□□ 0.9
Sptan1P16546 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sptan1P16546 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.67■□□□□ 0.9
Sptan1P16546 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.67■□□□□ 0.9
Sptan1P16546 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
Sptan1P16546 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sptan1P16546 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sptan1P16546 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sptan1P16546 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sptan1P16546 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.64■□□□□ 0.89
Sptan1P16546 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Sptan1P16546 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptan1P16546 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptan1P16546 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptan1P16546 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptan1P16546 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sptan1P16546 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sptan1P16546 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.62■□□□□ 0.89
Sptan1P16546 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sptan1P16546 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sptan1P16546 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sptan1P16546 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sptan1P16546 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sptan1P16546 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.59■□□□□ 0.89
Sptan1P16546 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sptan1P16546 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Sptan1P16546 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Sptan1P16546 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.57■□□□□ 0.88
Sptan1P16546 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sptan1P16546 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sptan1P16546 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Sptan1P16546 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.57■□□□□ 0.88
Sptan1P16546 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sptan1P16546 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sptan1P16546 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sptan1P16546 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sptan1P16546 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sptan1P16546 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sptan1P16546 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.53■□□□□ 0.88
Sptan1P16546 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.53■□□□□ 0.88
Sptan1P16546 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptan1P16546 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sptan1P16546 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sptan1P16546 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Sptan1P16546 Mir3960-201ENSMUST00000198213 73 ntBASIC20.51■□□□□ 0.87
Sptan1P16546 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.51■□□□□ 0.87
Sptan1P16546 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptan1P16546 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sptan1P16546 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sptan1P16546 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptan1P16546 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptan1P16546 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptan1P16546 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptan1P16546 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptan1P16546 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sptan1P16546 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptan1P16546 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptan1P16546 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.47■□□□□ 0.87
Sptan1P16546 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptan1P16546 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptan1P16546 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptan1P16546 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Sptan1P16546 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sptan1P16546 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sptan1P16546 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.46■□□□□ 0.87
Sptan1P16546 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.46■□□□□ 0.87
Sptan1P16546 Rps24-207ENSMUST00000224568 714 ntBASIC20.46■□□□□ 0.87
Sptan1P16546 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.45■□□□□ 0.86
Sptan1P16546 Gm30023-201ENSMUST00000197970 889 ntBASIC20.45■□□□□ 0.86
Sptan1P16546 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptan1P16546 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptan1P16546 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptan1P16546 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.44■□□□□ 0.86
Sptan1P16546 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sptan1P16546 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sptan1P16546 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.44■□□□□ 0.86
Sptan1P16546 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.44■□□□□ 0.86
Sptan1P16546 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sptan1P16546 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sptan1P16546 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sptan1P16546 Serp2-204ENSMUST00000228055 705 ntBASIC20.43■□□□□ 0.86
Sptan1P16546 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms