Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PtcraP0C6B2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.54■□□□□ 0.88
PtcraP0C6B2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PtcraP0C6B2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.54■□□□□ 0.88
PtcraP0C6B2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PtcraP0C6B2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PtcraP0C6B2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PtcraP0C6B2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PtcraP0C6B2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PtcraP0C6B2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PtcraP0C6B2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.52■□□□□ 0.88
PtcraP0C6B2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PtcraP0C6B2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.52■□□□□ 0.87
PtcraP0C6B2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PtcraP0C6B2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PtcraP0C6B2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PtcraP0C6B2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PtcraP0C6B2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.49■□□□□ 0.87
PtcraP0C6B2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.49■□□□□ 0.87
PtcraP0C6B2 Particl-201ENSMUST00000205370 1560 ntBASIC20.49■□□□□ 0.87
PtcraP0C6B2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.48■□□□□ 0.87
PtcraP0C6B2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PtcraP0C6B2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PtcraP0C6B2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PtcraP0C6B2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PtcraP0C6B2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PtcraP0C6B2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PtcraP0C6B2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PtcraP0C6B2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PtcraP0C6B2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PtcraP0C6B2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.46■□□□□ 0.87
PtcraP0C6B2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PtcraP0C6B2 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.45■□□□□ 0.86
PtcraP0C6B2 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.45■□□□□ 0.86
PtcraP0C6B2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.45■□□□□ 0.86
PtcraP0C6B2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PtcraP0C6B2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.45■□□□□ 0.86
PtcraP0C6B2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PtcraP0C6B2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PtcraP0C6B2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PtcraP0C6B2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PtcraP0C6B2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PtcraP0C6B2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PtcraP0C6B2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PtcraP0C6B2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PtcraP0C6B2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PtcraP0C6B2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PtcraP0C6B2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PtcraP0C6B2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtcraP0C6B2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtcraP0C6B2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PtcraP0C6B2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PtcraP0C6B2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PtcraP0C6B2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PtcraP0C6B2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.38■□□□□ 0.85
PtcraP0C6B2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.38■□□□□ 0.85
PtcraP0C6B2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PtcraP0C6B2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PtcraP0C6B2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PtcraP0C6B2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PtcraP0C6B2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PtcraP0C6B2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PtcraP0C6B2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PtcraP0C6B2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PtcraP0C6B2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PtcraP0C6B2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PtcraP0C6B2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PtcraP0C6B2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PtcraP0C6B2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.33■□□□□ 0.85
PtcraP0C6B2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PtcraP0C6B2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PtcraP0C6B2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PtcraP0C6B2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PtcraP0C6B2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PtcraP0C6B2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PtcraP0C6B2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PtcraP0C6B2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.31■□□□□ 0.84
PtcraP0C6B2 Gm37136-201ENSMUST00000194368 194 ntBASIC20.31■□□□□ 0.84
PtcraP0C6B2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PtcraP0C6B2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.31■□□□□ 0.84
PtcraP0C6B2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.31■□□□□ 0.84
PtcraP0C6B2 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.31■□□□□ 0.84
PtcraP0C6B2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PtcraP0C6B2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PtcraP0C6B2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.3■□□□□ 0.84
PtcraP0C6B2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PtcraP0C6B2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PtcraP0C6B2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PtcraP0C6B2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PtcraP0C6B2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.29■□□□□ 0.84
PtcraP0C6B2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PtcraP0C6B2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.28■□□□□ 0.84
PtcraP0C6B2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
PtcraP0C6B2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.27■□□□□ 0.84
PtcraP0C6B2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PtcraP0C6B2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PtcraP0C6B2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PtcraP0C6B2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PtcraP0C6B2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PtcraP0C6B2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms