Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.01■□□□□ 0.31
TcraP01849 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TcraP01849 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TcraP01849 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TcraP01849 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TcraP01849 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TcraP01849 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17■□□□□ 0.31
TcraP01849 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TcraP01849 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TcraP01849 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TcraP01849 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TcraP01849 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TcraP01849 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TcraP01849 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.99■□□□□ 0.31
TcraP01849 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TcraP01849 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TcraP01849 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TcraP01849 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TcraP01849 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TcraP01849 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TcraP01849 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TcraP01849 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TcraP01849 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TcraP01849 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TcraP01849 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TcraP01849 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TcraP01849 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TcraP01849 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TcraP01849 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.96■□□□□ 0.31
TcraP01849 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TcraP01849 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.96■□□□□ 0.31
TcraP01849 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
TcraP01849 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.96■□□□□ 0.3
TcraP01849 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TcraP01849 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TcraP01849 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TcraP01849 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TcraP01849 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TcraP01849 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TcraP01849 Peli2-204ENSMUST00000226513 1320 ntBASIC16.95■□□□□ 0.3
TcraP01849 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TcraP01849 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.94■□□□□ 0.3
TcraP01849 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TcraP01849 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TcraP01849 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TcraP01849 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TcraP01849 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TcraP01849 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TcraP01849 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TcraP01849 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TcraP01849 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TcraP01849 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TcraP01849 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TcraP01849 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TcraP01849 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TcraP01849 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TcraP01849 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.93■□□□□ 0.3
TcraP01849 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TcraP01849 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TcraP01849 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TcraP01849 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TcraP01849 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TcraP01849 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TcraP01849 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TcraP01849 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TcraP01849 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TcraP01849 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TcraP01849 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TcraP01849 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TcraP01849 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TcraP01849 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TcraP01849 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TcraP01849 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TcraP01849 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TcraP01849 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TcraP01849 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TcraP01849 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TcraP01849 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TcraP01849 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TcraP01849 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TcraP01849 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TcraP01849 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TcraP01849 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TcraP01849 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TcraP01849 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TcraP01849 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TcraP01849 Gm24804-201ENSMUST00000174982 85 ntBASIC16.86■□□□□ 0.29
TcraP01849 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.86■□□□□ 0.29
TcraP01849 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TcraP01849 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TcraP01849 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TcraP01849 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TcraP01849 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TcraP01849 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TcraP01849 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.84■□□□□ 0.29
TcraP01849 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TcraP01849 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TcraP01849 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TcraP01849 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TcraP01849 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms