Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.36■□□□□ 0.85
P01804 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P01804 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P01804 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.34■□□□□ 0.85
P01804 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
P01804 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P01804 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P01804 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P01804 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.32■□□□□ 0.84
P01804 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P01804 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P01804 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
P01804 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P01804 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
P01804 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P01804 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P01804 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
P01804 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
P01804 Particl-201ENSMUST00000205370 1560 ntBASIC20.29■□□□□ 0.84
P01804 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.29■□□□□ 0.84
P01804 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01804 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01804 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.28■□□□□ 0.84
P01804 Gm7432-201ENSMUST00000210343 879 ntBASIC20.28■□□□□ 0.84
P01804 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.27■□□□□ 0.84
P01804 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
P01804 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01804 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01804 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P01804 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01804 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
P01804 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01804 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01804 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01804 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P01804 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P01804 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
P01804 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P01804 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.23■□□□□ 0.83
P01804 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
P01804 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.22■□□□□ 0.83
P01804 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.22■□□□□ 0.83
P01804 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P01804 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P01804 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01804 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01804 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.19■□□□□ 0.82
P01804 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01804 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01804 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P01804 Gm11599-201ENSMUST00000118720 878 ntBASIC20.16■□□□□ 0.82
P01804 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01804 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01804 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01804 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
P01804 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.14■□□□□ 0.81
P01804 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
P01804 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
P01804 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
P01804 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.11■□□□□ 0.81
P01804 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.11■□□□□ 0.81
P01804 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
P01804 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01804 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
P01804 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
P01804 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01804 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.11■□□□□ 0.81
P01804 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01804 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
P01804 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01804 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
P01804 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P01804 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01804 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01804 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01804 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
P01804 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P01804 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01804 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.08■□□□□ 0.81
P01804 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.08■□□□□ 0.81
P01804 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01804 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01804 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01804 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01804 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
P01804 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01804 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01804 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.06■□□□□ 0.8
P01804 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01804 Gm37136-201ENSMUST00000194368 194 ntBASIC20.05■□□□□ 0.8
P01804 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01804 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
P01804 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01804 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms