Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.54■□□□□ 0.56
P01788 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.54■□□□□ 0.56
P01788 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
P01788 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01788 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01788 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01788 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01788 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01788 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01788 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01788 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01788 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01788 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01788 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.51■□□□□ 0.55
P01788 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P01788 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01788 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01788 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
P01788 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.5■□□□□ 0.55
P01788 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01788 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
P01788 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01788 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.49■□□□□ 0.55
P01788 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
P01788 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P01788 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
P01788 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
P01788 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
P01788 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01788 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01788 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01788 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01788 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.48■□□□□ 0.55
P01788 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P01788 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01788 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
P01788 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01788 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
P01788 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01788 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01788 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P01788 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P01788 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01788 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.45■□□□□ 0.54
P01788 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P01788 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
P01788 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01788 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01788 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01788 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P01788 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P01788 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01788 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01788 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.43■□□□□ 0.54
P01788 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01788 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01788 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
P01788 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01788 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01788 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.42■□□□□ 0.54
P01788 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01788 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01788 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01788 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P01788 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P01788 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.41■□□□□ 0.54
P01788 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.41■□□□□ 0.54
P01788 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01788 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P01788 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
P01788 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.4■□□□□ 0.54
P01788 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.4■□□□□ 0.54
P01788 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01788 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01788 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.39■□□□□ 0.53
P01788 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01788 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P01788 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01788 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01788 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01788 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P01788 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P01788 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01788 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.38■□□□□ 0.53
P01788 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01788 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01788 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01788 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
P01788 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.36■□□□□ 0.53
P01788 Zfp131-205ENSMUST00000223812 663 ntBASIC18.36■□□□□ 0.53
P01788 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01788 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
P01788 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01788 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
P01788 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.35■□□□□ 0.53
P01788 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
P01788 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
P01788 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01788 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01788 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms