Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim3O70209 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim3O70209 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim3O70209 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim3O70209 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pdlim3O70209 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim3O70209 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pdlim3O70209 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim3O70209 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim3O70209 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim3O70209 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pdlim3O70209 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim3O70209 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim3O70209 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim3O70209 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim3O70209 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim3O70209 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim3O70209 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim3O70209 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.24■□□□□ 0.99
Pdlim3O70209 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim3O70209 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.24■□□□□ 0.99
Pdlim3O70209 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim3O70209 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim3O70209 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim3O70209 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim3O70209 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim3O70209 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pdlim3O70209 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim3O70209 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim3O70209 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pdlim3O70209 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim3O70209 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim3O70209 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim3O70209 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Pdlim3O70209 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim3O70209 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim3O70209 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim3O70209 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pdlim3O70209 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pdlim3O70209 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim3O70209 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim3O70209 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.19■□□□□ 0.98
Pdlim3O70209 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim3O70209 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim3O70209 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim3O70209 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim3O70209 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim3O70209 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim3O70209 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.17■□□□□ 0.98
Pdlim3O70209 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pdlim3O70209 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim3O70209 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim3O70209 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Pdlim3O70209 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim3O70209 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.16■□□□□ 0.98
Pdlim3O70209 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdlim3O70209 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdlim3O70209 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.16■□□□□ 0.98
Pdlim3O70209 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Pdlim3O70209 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pdlim3O70209 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim3O70209 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pdlim3O70209 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim3O70209 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim3O70209 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pdlim3O70209 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim3O70209 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim3O70209 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim3O70209 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim3O70209 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim3O70209 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim3O70209 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pdlim3O70209 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.12■□□□□ 0.97
Pdlim3O70209 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim3O70209 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim3O70209 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.12■□□□□ 0.97
Pdlim3O70209 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim3O70209 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pdlim3O70209 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Pdlim3O70209 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Pdlim3O70209 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim3O70209 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim3O70209 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim3O70209 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim3O70209 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.08■□□□□ 0.97
Pdlim3O70209 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim3O70209 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.08■□□□□ 0.97
Pdlim3O70209 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim3O70209 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim3O70209 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim3O70209 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim3O70209 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.06■□□□□ 0.96
Pdlim3O70209 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.06■□□□□ 0.96
Pdlim3O70209 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Pdlim3O70209 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim3O70209 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim3O70209 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim3O70209 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim3O70209 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim3O70209 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms