Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SncaO55042 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SncaO55042 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.34■□□□□ 0.69
SncaO55042 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SncaO55042 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SncaO55042 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SncaO55042 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SncaO55042 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.33■□□□□ 0.68
SncaO55042 Zfp131-205ENSMUST00000223812 663 ntBASIC19.33■□□□□ 0.68
SncaO55042 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SncaO55042 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SncaO55042 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SncaO55042 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SncaO55042 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SncaO55042 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SncaO55042 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SncaO55042 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.32■□□□□ 0.68
SncaO55042 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SncaO55042 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SncaO55042 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SncaO55042 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SncaO55042 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SncaO55042 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SncaO55042 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SncaO55042 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SncaO55042 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SncaO55042 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SncaO55042 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SncaO55042 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SncaO55042 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SncaO55042 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SncaO55042 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.29■□□□□ 0.68
SncaO55042 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SncaO55042 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SncaO55042 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SncaO55042 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
SncaO55042 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SncaO55042 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SncaO55042 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SncaO55042 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.28■□□□□ 0.68
SncaO55042 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.28■□□□□ 0.68
SncaO55042 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SncaO55042 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SncaO55042 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SncaO55042 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.25■□□□□ 0.67
SncaO55042 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SncaO55042 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SncaO55042 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SncaO55042 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SncaO55042 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SncaO55042 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SncaO55042 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.24■□□□□ 0.67
SncaO55042 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SncaO55042 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SncaO55042 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SncaO55042 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.23■□□□□ 0.67
SncaO55042 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SncaO55042 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SncaO55042 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaO55042 Gm24970-201ENSMUST00000175582 82 ntBASIC19.21■□□□□ 0.67
SncaO55042 Gm9397-201ENSMUST00000200125 605 ntBASIC19.21■□□□□ 0.67
SncaO55042 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaO55042 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaO55042 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SncaO55042 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaO55042 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SncaO55042 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaO55042 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.2■□□□□ 0.66
SncaO55042 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.2■□□□□ 0.66
SncaO55042 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.2■□□□□ 0.66
SncaO55042 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.2■□□□□ 0.66
SncaO55042 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.18■□□□□ 0.66
SncaO55042 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SncaO55042 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SncaO55042 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SncaO55042 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SncaO55042 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SncaO55042 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SncaO55042 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SncaO55042 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SncaO55042 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SncaO55042 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SncaO55042 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SncaO55042 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SncaO55042 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SncaO55042 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.13■□□□□ 0.65
SncaO55042 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SncaO55042 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SncaO55042 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SncaO55042 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SncaO55042 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SncaO55042 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SncaO55042 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SncaO55042 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SncaO55042 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SncaO55042 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SncaO55042 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.1■□□□□ 0.65
SncaO55042 Gm45855-201ENSMUST00000212546 880 ntBASIC19.1■□□□□ 0.65
SncaO55042 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SncaO55042 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms