Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx4O35137 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Alx4O35137 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.05■□□□□ 0.96
Alx4O35137 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx4O35137 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Alx4O35137 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Alx4O35137 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx4O35137 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx4O35137 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx4O35137 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx4O35137 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx4O35137 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Alx4O35137 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Alx4O35137 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx4O35137 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Alx4O35137 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Alx4O35137 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.02■□□□□ 0.96
Alx4O35137 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Alx4O35137 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Alx4O35137 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx4O35137 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx4O35137 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Alx4O35137 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx4O35137 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx4O35137 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx4O35137 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Alx4O35137 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx4O35137 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx4O35137 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx4O35137 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx4O35137 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.99■□□□□ 0.95
Alx4O35137 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Alx4O35137 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Alx4O35137 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Alx4O35137 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Alx4O35137 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.97■□□□□ 0.95
Alx4O35137 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx4O35137 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Alx4O35137 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.96■□□□□ 0.95
Alx4O35137 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.96■□□□□ 0.95
Alx4O35137 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Alx4O35137 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Alx4O35137 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Alx4O35137 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Alx4O35137 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Alx4O35137 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx4O35137 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx4O35137 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Alx4O35137 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Alx4O35137 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx4O35137 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.93■□□□□ 0.94
Alx4O35137 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx4O35137 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx4O35137 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Alx4O35137 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.92■□□□□ 0.94
Alx4O35137 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx4O35137 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.91■□□□□ 0.94
Alx4O35137 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx4O35137 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx4O35137 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx4O35137 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx4O35137 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.88■□□□□ 0.93
Alx4O35137 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.88■□□□□ 0.93
Alx4O35137 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Alx4O35137 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Alx4O35137 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Alx4O35137 Particl-201ENSMUST00000205370 1560 ntBASIC20.88■□□□□ 0.93
Alx4O35137 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Alx4O35137 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Alx4O35137 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Alx4O35137 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.87■□□□□ 0.93
Alx4O35137 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.87■□□□□ 0.93
Alx4O35137 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Alx4O35137 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Alx4O35137 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Alx4O35137 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Alx4O35137 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Alx4O35137 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Alx4O35137 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Alx4O35137 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.83■□□□□ 0.93
Alx4O35137 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.82■□□□□ 0.92
Alx4O35137 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Alx4O35137 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alx4O35137 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alx4O35137 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Alx4O35137 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alx4O35137 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Alx4O35137 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Alx4O35137 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Alx4O35137 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.8■□□□□ 0.92
Alx4O35137 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Alx4O35137 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Alx4O35137 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Alx4O35137 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Alx4O35137 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.78■□□□□ 0.92
Alx4O35137 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alx4O35137 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Alx4O35137 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Alx4O35137 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Alx4O35137 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms